Jaka Sočan

1. SOČAN, Jaka. Validacija proteinskih struktur z analizo vodikovih vezi : diplomsko delo. Ljubljana: [J. Sočan], 2013. 79 f., ilustr. [COBISS.SI-ID 37042437]

2. SOČAN, Jaka, KAZEMI, Masoud, ISAKSEN, Geir Villy, BRANDSDAL, Bjørn Olav, ÅQVIST, Johan. Catalytic adaptation of psychrophilic elastase. Biochemistry. [Print ed.]. 22 May 2018, vol. 57, iss. 20, str. 2984-2993, ilustr. ISSN 0006-2960. https://pubs.acs.org/doi/pdf/10.1021/acs.biochem.8b00078, DOI: 10.1021/acs.biochem.8b00078. [COBISS.SI-ID 46220547]

3. KAZEMI, Masoud, SOČAN, Jaka, HIMO, Fahmi, ÅQVIST, Johan. Mechanistic alternatives for peptide bond formation on the ribosome. Nucleic acids research. 20 Jun. 2018, vol. 46, iss. 11, str. 5345-5354. ISSN 0305-1048. https://academic.oup.com/nar/article/46/11/5345/4994212?searchresult=1, DOI: 10.1093/nar/gky367. [COBISS.SI-ID 46219267]

4. SOČAN, Jaka, ISAKSEN, Geir Villy, BRANDSDAL, Bjørn Olav, ÅQVIST, Johan. Towards rational computational engineering of psychrophilic enzymes. Scientific reports. 16 Dec. 2019, vol. 9, str. 19147-1-19147-10. ISSN 2045-2322. https://www.nature.com/articles/s41598-019-55697-4, DOI: 10.1038/s41598-019-55697-4. [COBISS.SI-ID 46219779]

5. SOČAN, Jaka, PURG, Miha, ÅQVIST, Johan. Computer simulations explain the anomalous temperature optimum in a cold-adapted enzyme. Nature communications. 26 May 2020, vol. 11, str. 2644 -1-2644 -11, ilustr. ISSN 2041-1723. https://www.nature.com/articles/s41467-020-16341-2, DOI: 10.1038/s41467-020-16341-2. [COBISS.SI-ID 46220291]

6. SOČAN, Jaka. Enzyme cold adaptation through evolution of protein flexibility. Uppsala: [J. Sočan], 2020. Digital comprehensive summaries of Uppsala dissertations from the Faculty of Science and Technology, 1915. ISBN 978-91-513-0900-2. ISSN 1651-6214. [COBISS.SI-ID 46463491]

7. ÅQVIST, Johan, SOČAN, Jaka, PURG, Miha. Hidden conformational states and strange temperature optima in enzyme catalysis. Biochemistry. [Print ed.]. 13 Oct. 2020, vol. 59, iss. 40, str. 3844-3855, ilustr. ISSN 0006-2960. https://pubs.acs.org/doi/10.1021/acs.biochem.0c00705, DOI: 10.1021/acs.biochem.0c00705. [COBISS.SI-ID 46220803]

8. ENT, Florian van der, SKAGSETH, Susann, LUND, Bjarte A., SOČAN, Jaka, GRIESE, Julia J., BRANDSDAL, Bjørn Olav, ÅQVIST, Johan. Computational design of the temperature optimum of an enzyme reaction. Science advances. 28 Jun. 2023, vol. 9, iss. 26, [article no.] eadi0963, str. 1-10, ilustr. ISSN 2375-2548. https://www.science.org/doi/pdf/10.1126/sciadv.adi0963, DOI: 10.1126/sciadv.adi0963. [COBISS.SI-ID 161377539]

9. SVENŠEK, Daniel, SOČAN, Jaka, PRAPROTNIK, Matej. Density–nematic coupling in isotropic solution of DNA : multiscale model. Macromolecular rapid communications. [Online ed.]. Dec. 2024, vol. 45, iss. 24, [article no.] 2400382, str. 1-12, ilustr. ISSN 1521-3927. https://onlinelibrary.wiley.com/doi/10.1002/marc.202400382, Repozitorij Univerze v Ljubljani – RUL, DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, DOI: 10.1002/marc.202400382. [COBISS.SI-ID 205924099]

10. BABIČ, Davor, ZOTTEL, Alja, SOČAN, Jaka, NOVAK, Metka, BREZNIK, Barbara, MERZEL, Franci, JOVCHEVSKA, Ivana. Influence of siRNA targeting B7-H3 on glioblastoma-microglia spheroids and in silico optimization of nanobody affinity. V: NADIŽAR, Nejc (ur.). 20th CFGBC Symposium : book of abstracts : Slovenia, 11th – 12th June 2025. Electronic version. Ljubljana: University of Ljubljana, Faculty of Medicine, 2025. Str. 35. http://cfgbc.mf.uni-lj.si/wp-content/uploads/2025cfgbcsym20_bookofabstracts.pdf. [COBISS.SI-ID 240921347]

11. BABIČ, Dunja (avtor, korespondenčni avtor), ZOTTEL, Alja, SOČAN, Jaka, NOVAK, Metka, BREZNIK, Barbara, MERZEL, Franci, JOVCHEVSKA, Ivana. Influence of siRNA targeting B7-H3 on glioblastoma-microglia spheroids and in silico optimization of nanobody affinity. V: ŽEGURA, Bojana (ur.), et al. CutCancer Final Conference 2025 : shaping tomorrow : innovative approaches in genetic toxicology and cancer research : October 22nd-23rd 2025, National Institute of Biology (NIB) : book of abstracts. 1st ed. Ljubljana: National Institute of Biology, 2025. Str. 35. https://dirros.openscience.si/Dokument.php?id=35430&lang=slv. [COBISS.SI-ID 257136387]