Mateja Zupin

1. ZUPIN, Mateja. Ovčja volna in ostružki usnja kot organski gnojili v ekološki pridelavi koruze (Zea mays L.) : diplomsko delo = Sheep wool and leather waste as organic fertilizers in organic production of maize (Zea mays L.) : graduation thesis. Ljubljana: [M. Zupin], 2012. XI, 41 f., [12] f. pril., ilustr., preglednice. Biotehniška fakulteta, Oddelek za agronomijo, Diplomska dela, 2346. http://www.digitalna-knjiznica.bf.uni-lj.si/dn_zupin_mateja.pdf, Repozitorij Univerze v Ljubljani – RUL. [COBISS.SI-ID 7066233]

2. ZUPIN, Mateja, MARAS, Marko, ŠUŠTAR VOZLIČ, Jelka, KIDRIČ, Marjetka, VODNIK, Dominik, RAZINGER, Jaka, MEGLIČ, Vladimir. Characterization of the common bean (Phaseolus vulgaris L.) parent cultivars for furter genomic and transcriptomic analyses. V: RAMŠAK, Andreja (ur.), POTOČNIK, Uroš (ur.). Proceedings. 3rd Colloquium of genetics, Piran September 13th 2013. Ljubljana: Genetic Society of Slovenia, 2013. Str. 82. ISBN 978-961-90534-9-2, ISBN 978-961-93545-0-6. [COBISS.SI-ID 4320360]

3. ŠUŠTAR VOZLIČ, Jelka, MARAS, Marko, ZADRAŽNIK, Tanja, KIDRIČ, Marjetka, ZUPIN, Mateja, RAZINGER, Jaka, VODNIK, Dominik, MEGLIČ, Vladimir. Abiotic stress in agricultural plants: Phaseolus sp. and drought. V: DOLENC KOCE, Jasna (ur.), URBANEK KRAJNC, Andreja (ur.), GREBENC, Tine (ur.). Knjiga povzetkov = Book of abstracts. Ljubljana: Slovensko društvo za biologijo rastlin: = Slovenian Society of Plant Biology, 2014. Str. 16. ISBN 978-961-91014-4-5. [COBISS.SI-ID 4522856]

4. ZUPIN, Mateja, MARAS, Marko, MEGLIČ, Vladimir. Development of genetic map of common bean (Phaseolus vulgaris l.) for quantitative trait loci detection involved in response to drought. V: RAMŠAK, Andreja (ur.), POTOČNIK, Uroš (ur.). Proceedings. 4th Colloquium of Genetics, Piran, September 19th 2014. Ljubljana: Genetic Society of Slovenia, 2014. Str. 45. ISBN 978-961-90534-8-5. [COBISS.SI-ID 4538984]

5. ZUPIN, Mateja, MARAS, Marko, ŠUŠTAR VOZLIČ, Jelka, KIDRIČ, Marjetka, VODNIK, Dominik, RAZINGER, Jaka, MEGLIČ, Vladimir. Examination of physiological response of common bean (Phaseolus vulgaris L.) to drought stress. V: DOLENC KOCE, Jasna (ur.), URBANEK KRAJNC, Andreja (ur.), GREBENC, Tine (ur.). Knjiga povzetkov = Book of abstracts. Ljubljana: Slovensko društvo za biologijo rastlin: = Slovenian Society of Plant Biology, 2014. Str. 27. ISBN 978-961-91014-4-5. [COBISS.SI-ID 4523368]

6. ZUPIN, Mateja. Responses to drought stress in common bean (Phaseolus vulgaris L.) : QTL mapping : predstavitev posterja na delavnici Agricultural Omics, European Bioinformatics Institut, Hinxton, Velika Britanija, 17.-21.feb.2014. 2014. [COBISS.SI-ID 4417896]

7. GODEC, Boštjan, ZUPIN, Mateja. Sadno drevje - ali te poznam? : (praktični prikaz na stojnici) : aktivna udeležba na prireditvi Dan očarljivih rastlin, 23. maj 2014, Botanični vrt, Ljubljana. 2014. [COBISS.SI-ID 4471912]

8. ŠUŠTAR VOZLIČ, Jelka, MARAS, Marko, ZADRAŽNIK, Tanja, KIDRIČ, Marjetka, ZUPIN, Mateja, HOLLUNG, K., EGGE-JACOBSEN, Wolfgang, MEGLIČ, Vladimir, et al. Studies of drought stress response in Phaseolus vulgaris L. at gene, protein and protease level. V: STOILOV, Lyubomir (ur.). Plant physiology and genetics : achievements and challenges : conference program and book of abstracts : Scientific Conference Plant Physiology and Genetics Achievements and Challenges, 24-26 September 2014, Sofia, Bulgaria. Sofia: Institute of Plant Physiology and Genetics, 2014. Str. 14. [COBISS.SI-ID 4553064]

9. ZUPIN, Mateja, MARAS, Marko, SEDLAR, Aleš, VODNIK, Dominik, RAZINGER, Jaka, ŠUŠTAR VOZLIČ, Jelka, MEGLIČ, Vladimir. Development of genetic map and analysis of quantitative trait loci for drought tolerance in common bean (Phaseolus vulgaris L.). V: ŠIRCA, Saša (ur.), GERIČ STARE, Barbara (ur.), RAZINGER, Jaka (ur.). Plant health for sustainable agriculture : book of abstracts : conference, 11-12 May 2015, Ljubljana, Slovenia. Ljubljana: Kmetijski inštitut Slovenije: = Agricultural Institute of Slovenia, 2015. Str. 95. ISBN 978-961-6505-72-7. [COBISS.SI-ID 4731752]

10. ŠUŠTAR VOZLIČ, Jelka, MARAS, Marko, ZADRAŽNIK, Tanja, ZUPIN, Mateja, SEDLAR, Aleš, KIDRIČ, Marjetka, RAZINGER, Jaka, MEGLIČ, Vladimir. Drought stress response of common bean and development of genetic map for QTL analysis. V: DE RON, Antonio M. (ur.). V Meeting AEL : Plant proteins for the future. Pontevedra: Spanish Association for Legumes (AEL), 2015. Str. 171. Actas AEL, 6. [COBISS.SI-ID 5126760]

11. ZUPIN, Mateja, MARAS, Marko, SEDLAR, Aleš, ŠUŠTAR VOZLIČ, Jelka, RAZINGER, Jaka, VODNIK, Dominik, KIDRIČ, Marjetka, MEGLIČ, Vladimir. Identification of quantitative trait loci for drought tolerance in common bean (Phaseolus vulgaris L.). V: JAKŠE, Jernej (ur.), et al. Genetika 2015 : book of abstracts. 7th Congress of the Genetic Society of Slovenia and 7th Meeting of the Slovenian Society of Human Genetics, 20-23 September 2015, Rogaška Slatina, Slovenia. Ljubljana: Genetic Society of Slovenia: The Slovenian Society of Human Genetics, 2015. Str. 30. ISBN 978-961-93545-2-0. [COBISS.SI-ID 4962152]

12. ŠUŠTAR VOZLIČ, Jelka, MARAS, Marko, ZUPIN, Mateja, SEDLAR, Aleš, ZADRAŽNIK, Tanja, RAZINGER, Jaka, KIDRIČ, Marjetka, VODNIK, Dominik, PIPAN, Barbara, MEGLIČ, Vladimir. Genetic, proteomic and physiological background for breeding common bean for abiotic stress resistance. V: KÖLLIKER, Roland (ur.), BOLLER, Beat (ur.). Plant breeding : the art of bringing science to life : abstracts. 20th EUCARPIA General Congress, 29 Aug - 1 Sep 2016, Zurich, Switzerland. Zurich: Agroscope, 2016. Str. 299. ISBN 978-3-906804-22-4. [COBISS.SI-ID 5112936]

13. ZUPIN, Mateja, SEDLAR, Aleš, KIDRIČ, Marjetka, MEGLIČ, Vladimir. Drought-induced expression of aquaporin genes in leaves of two common bean cultivars differing in tolerance to drought stress. Journal of plant research. Jul. 2017, vol. 130, no. 4, str. 735-745. ISSN 0918-9440. DOI: 10.1007/s10265-017-0920-x. [COBISS.SI-ID 5239144]

14. ZUPIN, Mateja. Odziv navadnega fižola (Phaseolus vulgaris L.) na sušni stres : kvantitativno kartiranje lokusov : doktorska disertacija = Response to drought stress in common bean (Phaseolus vulgaris L.) : QTL mapping : doctoral dissertation. Ljubljana: [M. Zupin], 2017. XIV, 142, [68] str., ilustr. http://www.digitalna-knjiznica.bf.uni-lj.si/biotehnologija/dd_zupin_mateja.pdf, Repozitorij Univerze v Ljubljani – RUL, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 892279]

15. SEDLAR, Aleš, KIDRIČ, Marjetka, ZUPIN, Mateja, RAZINGER, Jaka, ŠUŠTAR VOZLIČ, Jelka, VODNIK, Dominik, SABOTIČ, Jerica, MEGLIČ, Vladimir. Gene expression and proteolytic activity of endopeptidases and aminopeptidases in common bean (Phaseolus vulgaris L.) exposed to drought. V: BAEBLER, Špela (ur.), et al. 7th Slovenian Symposium on Plant Biology with International Participation, Biotechnical Faculty, University of Ljubljana, September 17-18, 2018, Ljubljana, Slovenia. 1st electronic ed. Ljubljana: Silva Slovenica Publishing Centre, Slovenian Forestry Institute, 2018. Str. 55. ISBN 978-961-6993-44-9. https://doi.org/10.20315/SilvaSlovenica.0009. [COBISS.SI-ID 5586024]

16. SEDLAR, Aleš, ZUPIN, Mateja, MARAS, Marko, RAZINGER, Jaka, ŠUŠTAR VOZLIČ, Jelka, PIPAN, Barbara, MEGLIČ, Vladimir. QTL mapping for drought-responsive agronomic traits associated with physiology, phenology, and yield in an Andean intra-gene pool common bean population. Agronomy. 2020, vol. 10, iss. 2, str. 1-18, graf. prikazi, tabele. ISSN 2073-4395. https://www.mdpi.com/2073-4395/10/2/225/pdf, DOI: 10.3390/agronomy10020225. [COBISS.SI-ID 5983080]

17. KNEZ, Jure, SOBOČAN, Monika, KAVALAR, Rajko, ZUPIN, Mateja, BÜEDEFELD, Tomaž, POTOČNIK, Uroš, TAKAČ, Iztok. Clinicopathological characteristics of women with CTNNB1-mutated endometrial cancer. International journal of gynecological cancer, International journal of gynecological cancer. Supplement. [Online ed.]. suppl. 3, vol. 31, str. a101. ISSN 1525-1438, ISSN 1065-9544. https://ijgc.bmj.com/content/31/Suppl_3/A101.1, http://dx.doi.org/10.1136/ijgc-2021-ESGO.157. [COBISS.SI-ID 81459971]

18. GORENJAK, Mario, ZUPIN, Mateja, JEZERNIK, Gregor, SKOK, Pavel, POTOČNIK, Uroš. ELOVL7 gene region as s potential risk locus for adalimumab response in Slovenian patients with Crohn’s disease. V: ESHG 2021 - virtual conference. [S. l.]: European Society of Human Genetics, 2021. https://www.abstractsonline.com/pp8/#!/10372/presentation/1607. [COBISS.SI-ID 115006211]

19. PAVLIN, Mojca, REPAS, Jernej, VERANIČ, Peter, ZUPIN, Mateja, GOLE, Boris, POTOČNIK, Uroš, VODLAN, Maja. Metformin and 2-Deoxy-D-glucose multiple action on ER stress, autophagy and mitochondrial biogenesis supports anchorage independent growth in triple negative breast cancer cells. V: Cancer immunometabolism : abstract book : EMBO Workshop : 29 November - 1 December 2021 : Sitges, Barcelona, Spain. [S. l.: s. n.], 2021. Str. 104-105. [COBISS.SI-ID 90410499]

20. GORENJAK, Mario, ZUPIN, Mateja, JEZERNIK, Gregor, SKOK, Pavel, POTOČNIK, Uroš. Omics data integration identifies ELOVL7 and MMD gene regions as novel loci for adalimumab response in patients with Crohnʼs disease. Scientific reports. 2021, vol. 11, str. 1-12, ilustr. ISSN 2045-2322. https://www.nature.com/articles/s41598-021-84909-z, https://doi.org/10.1038/s41598-021-84909-z, DOI: 10.1038/s41598-021-84909-z. [COBISS.SI-ID 54882051]

21. PAVLIN, Mojca, REPAS, Jernej, VODLAN, Maja, GOLE, Boris, ZUPIN, Mateja, POTOČNIK, Uroš, VERANIČ, Peter, ZÜGNER, Elmar, MAGNES, Christoph. Anchorage independent growth induced by metabolic inhibitors as adaptations to energy and ER stress. V: ISCaM 2022 : abstract book. 9th Annual Meeting of the International Society of Cancer Metabolism, June 29th - July 2nd, 2022, Turin, Italy. Torino: Universita degli studi di Torino, 2022. Str. [157-158], ilustr. https://turinmetabolism.com/wp-content/uploads/2022/06/ABSTRACT-BOOK-ISCAM-2022.pdf. [COBISS.SI-ID 168461315]
projekt: P1-0055, P3-0108, P3-0067 and P3-0427, J3-6794 and J7-7424; financer: Slovenian Research Agency
projekt: IP-0510 BMCM; financer: Young researchers program and MIRIC UL
projekt: C3330-19-952026; financer: FE Infrastructure, and by the Ministry of Education, Science and Sport

22. REPAS, Jernej, ZUPIN, Mateja, VODLAN, Maja, VERANIČ, Peter, GOLE, Boris, POTOČNIK, Uroš, PAVLIN, Mojca. Combined metformin and 2-deoxy-D-glucose treatment reduces the expression of PD-L1/PD-1 proteins in triple negative breast cancer cells and model T cells : Cell Symposia: Translational Immunometabolism, June 26-28, 2022, Basel, Switzerland. [COBISS.SI-ID 168452611]

23. REPAS, Jernej, ZUPIN, Mateja, VODLAN, Maja, VERANIČ, Peter, GOLE, Boris, POTOČNIK, Uroš, PAVLIN, Mojca. Dual effect of combined metformin and 2-deoxy-D-glucose treatment on mitochondrial biogenesis and PD-L1 expression in triple-negative breast cancer cells. Cancers. 2022, vol. 14, issue 5, str. [1]-30, ilustr. ISSN 2072-6694. https://doi.org/10.3390/cancers14051343, https://www.mdpi.com/2072-6694/14/5/1343, Repozitorij Univerze v Ljubljani – RUL, DOI: 10.3390/cancers14051343. [COBISS.SI-ID 100035587]
projekt: Raziskava sofinancirana s strani Slovenian Research Agency research core funding No. P1-0055
projekt: Raziskava sofinancirana iz MRIC UL IP-0510 BMCM
projekt: Raziskava sofinancirana iz FE Infrastructure program
projekt: Sofinancer Slovenian Research Agency young researchers program
projekt: J3-6794 Celična energijska presnova kot tarča za zdravljenje raka - genski in farmakološki pristop; financer: ARRS
projekt: J7-7424 Analiza možnih škodljivih učinkov nanodelcev in spremljajočih mehanizmov - od fizikalno-kemijske ter in vitro karakterizacije do aktivacije prirojenega imunskega sistema; financer: ARRS
projekt: P3-0067 Farmakologija in farmakogenomika; financer: ARRS
projekt: P3-0427 Sistemski pristopi k raziskavam človeškega genoma za personalizirano medicino kroničnih imunskih bolezni; financer: ARRS
projekt: Sofinancer Ministry of Education, Science and Sport (C3330-19-952026)
projekt: P3-0108 Diferenciacija urotelijskih celic; financer: ARRS

24. REPAS, Jernej, ZÜGNER, Elmar, ZUPIN, Mateja, VODLAN, Maja, VERANIČ, Peter, GOLE, Boris, POTOČNIK, Uroš, MAGNES, Christoph, PAVLIN, Mojca. Growth surface detachment and mitochondrial biogenesis as adaptive responses to metformin and 2-deoxy-D-glucose induced energy and ER stress in breast cancer cells. V: ISCaM 2022 : abstract book. 9th Annual Meeting of the International Society of Cancer Metabolism, June 29th - July 2nd, 2022, Turin, Italy. Torino: Universita degli studi di Torino, 2022. Str. [159-161], ilustr. https://turinmetabolism.com/wp-content/uploads/2022/06/ABSTRACT-BOOK-ISCAM-2022.pdf. [COBISS.SI-ID 168463875]
projekt: P1-0055, P3-0108, P3-0067 and P3-0427, J3-6794 and J7-7424; financer: Slovenian Research Agency
projekt: IP-0510 BMCM; financer: Young researchers program and MIRIC UL
projekt: C3330-19-952026; financer: FE Infrastructure, and by the Ministry of Education, Science and Sport

25. KRUŠIČ, Martina, GOLE, Boris, ZUPIN, Mateja, GORENJAK, Mario, KODER, Silvo, SKOK, Pavel, PERNAT DROBEŽ, Cvetka, POTOČNIK, Uroš. MMD gene expression is increased in peripheral monocytes of Crohn’s disease patients unresponsive to adalimumab treatment and correlates with the TNF expression in the in vitro LPS-treated macrophages : predavanje na Science, Engineering & Technology International Conference, 14. 8. 2022 (Vebleo Webinar). [COBISS.SI-ID 118007043]

26. KNEZ, Jure, SOBOČAN, Monika, BELAK MAGDALENIĆ, Urška, KAVALAR, Rajko, ZUPIN, Mateja, BÜDEFELD, Tomaž, POTOČNIK, Uroš, TAKAČ, Iztok. Pre-treatment risk assessment of women with endometrial cancer : differences in outcomes of molecular and clinical classifications in the Slovenian patient cohort. Radiology and oncology. [Print ed.]. Mar. 2022, vol. 56, no. 1, str. 76-82, ix. ISSN 1318-2099. https://doi.org/10.2478/raon-2021-0036, https://sciendo.com/article/10.2478/raon-2021-0036, DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, Digitalna knjižnica Slovenije - dLib.si, DOI: 10.2478/raon-2021-0036. [COBISS.SI-ID 77575683]
projekt: P3-0067 Farmakologija in farmakogenomika; financer: ARRS
projekt: IRP-2019/02-13 Vloga novih metod v diagnostiki in zdravljenju pacientk z rakom endometrija; financer: UKC Maribor