Katja Stojkovič

1. STOJKOVIČ, Katja. Opis združbe arhej v anaerobnem sedimentu Blejskega jezera : diplomsko delo, univerzitetni študij = Characterisation of archaeal community structure in anaerobic sediment of Lake Bled : graduation thesis, university studies. Ljubljana: [K. Gorenc], 2008. X, 50 f., graf. prikazi, tabele. Biotehniška fakulteta, Enota medoddelčnega študija mikrobiologije, Ljubljana, Diplomske naloge, 355. [COBISS.SI-ID 3493752]

2. MANDIĆ-MULEC, Ines, STOJKOVIČ, Katja, GAMS PETRIŠIČ, Marinka, OGRINC, Nives, FAGANELI, Jadran. Methanogenesis and the phylogenetic composition of archaea in Alpine lacustrine sediments (lake Bled, NW Slovenia). V: TURK, Valentina (ur.), TURK, Samo (ur.). Abstract book. SAME 11 - The 11th Symposium on Aquatic Microbial Ecology, August 30 - September 04 2009, Piran, Slovenia. Piran: National Institute of Biology, Marine Biology Station, 2009. Str. 157. ISBN 978-961-92543-1-8. [COBISS.SI-ID 22884903]

3. MANDIĆ-MULEC, Ines, STOJKOVIČ, Katja, GAMS PETRIŠIČ, Marinka, OGRINC, Nives, FAGANELI, Jadran. Methanogenesis in alpine lacustrine sediments (Lake Bled, NW Slovenia). V: DILLY, Oliver (ur.), PFEIFFER, Eva-Maria (ur.). Environmental changes and sustainability of biogeochemical cycling : book of abstracts. XIX. International Symposium on Environmental Biogeochemistry, September 14 to 18, 2009, Hamburg. Hamburg: University of Hamburg, 2009. Str. 95. [COBISS.SI-ID 22922791]

4. STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd. Preliminary characterization of a putative large transposon from Prevotella bryantii B14. V: ISAM 2009. [S. l.: s. n., 2009]. Str. 27. [COBISS.SI-ID 2471816]

5. OGRINC, Nives, GAMS PETRIŠIČ, Marinka, MANDIĆ-MULEC, Ines, OGRINC, Nives, STOJKOVIČ, Katja, FAGANELI, Jadran. Lipid biomarkers in methanogenic sediments of the alpine lake Bled (SW Slovenia) : [presented at Goldschmidt 2010: Earth, energy and the environment, June 13-18, 2010, Knoxville, Tennessee]. Geochimica et cosmochimica acta. [Print ed.]. 2010, vol. 74, no. 12, suppl. 1, str. a773. ISSN 0016-7037. [COBISS.SI-ID 23816487]

6. STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd. Bioinformatic evidence and characterization of novel putative large conjugative transposons from genera Bacteroides and Prevotella. V: JANEŽIČ, Sandra (ur.), et al. Abstract book. 9th Congress of the Slovenian Biochemical Society [also] 5th Congress of the Slovenian Microbiological Society with International Participation [also] 3rd CEFORM (Central European Forum for Microbiology), Maribor, 12th - 15th October 2011. Maribor: Zavod za zdravstveno varstvo, 2011. Str. 190. ISBN 978-961-90895-5-2. [COBISS.SI-ID 2953864]

7. FAGANELI, Jadran, OGRINC, Nives, GAMS PETRIŠIČ, Marinka, STOJKOVIČ, Katja, MANDIĆ-MULEC, Ines. Lipid biomarkers in methanogenic sediments of Alpine lake Bled (SW Slovenia). V: Frontiers in biogeochemistry : conference proceedings. ISEB 2011, 20th International Symposium on Environmental Biogeochemistry, 27th-30th September 2011, Istanbul, Turkey. [S. l.: s. n.], 2011. Str. o-16. [COBISS.SI-ID 25128743]

8. NOGRAŠEK, Brigita, STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd. A phylogenetic survey of available 16S rRNA sequences from cultured and not-yet isolated members of the genera Bacteroides and Prevotella. V: JANEŽIČ, Sandra (ur.), et al. Abstract book. 9th Congress of the Slovenian Biochemical Society [also] 5th Congress of the Slovenian Microbiological Society with International Participation [also] 3rd CEFORM (Central European Forum for Microbiology), Maribor, 12th - 15th October 2011. Maribor: Zavod za zdravstveno varstvo, 2011. Str. 205. ISBN 978-961-90895-5-2. [COBISS.SI-ID 2953608]

9. NOGRAŠEK, Brigita, STOJKOVIČ, Katja, ACCETTO, Tomaž, JERMAN, Vesna, STRES, Blaž, AVGUŠTIN, Gorazd. A phylogenetic survey of not-yet isolated members of the phylum Bacteroidetes from animal and human gut and development of the isolation strategies. V: FABIAN, Dušan (ur.). From research to practice application : conference book. [1st ed.]. Košice: Institute of Animal Physiology, Slovak Academy of Science, 2011. Str. 58. ISBN 978-80-968618-6-6. [COBISS.SI-ID 2883208]

10. STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd. Bioinformatic evidence and characterization of novel putative large conjugative transposons from genera Bacteroides and Prevotella. V: BERNALIER-DONADILLE, Annick (ur.). Gut microbiology : gut microbiota : friend of foe?. f: 8th INRA-Rowett Symposium on Gut Microbiology 17-20 June 2012 Clermont-Farrand, France. [Clermont-Ferrand: s.n., 2012?]. Str. 48. ISBN 978-2-11-129131-7. [COBISS.SI-ID 3072648]

11. STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd, 14th International Symposium on Microbial Ecology, 19-24 August 2012, Copenhagen Dernmark. Bioinformatic evidence and characterization of novel putative large conjugative transposons from genera Bacteroides and Prevotella. V: Abstract book. [S. l.: The International Society for Microbiology Ecology, 2012?]. Str. 523-524. [COBISS.SI-ID 3313032]

12. STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd. Bioinformatic evidence and characterization of novel putative large conjugative transposons residing in genomes of genera Bacteroides and Prevotella. Folia microbiologica. [Print ed.]. 2012, vol. 57, no. 4, str. 285-290. ISSN 0015-5632. http://www.springerlink.com/content/rm17547259520w21/fulltext.pdf, Repozitorij Univerze v Ljubljani – RUL, DOI: 10.1007/s12223-012-0126-5. [COBISS.SI-ID 3042440]

13. MANDIĆ-MULEC, Ines, STOJKOVIČ, Katja, GAMS PETRIŠIČ, Marinka, FAGANELI, Jadran, OGRINC, Nives. Methanogenesis pathways in a stratified eutrophic alpine lake (Lake Bled, Slovenia). Limnology and oceanography. 2012, vol. 57, no. 3, str. 868-880. ISSN 0024-3590. http://www.aslo.org/lo/pdf/vol_57/issue_3/0868.pdf, Repozitorij Univerze v Ljubljani – RUL, DOI: 10.4319/lo.2012.57.3.0868. [COBISS.SI-ID 2554703]

14. STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd. Effect of ionophore sodium monesin on phenotypic, metabolic and genetic traits of ruminal bacteria from the genus Prevotella. V: INSAM, Heribert (ur.), PODMIRSEG, Sabine M. (ur.), WAGNER, Andreas O. (ur.). 8th International Symposium on Anaerobic Microbiology (ISAM8), Innsbruck, Austria, June 12-15, 2013. 1st ed. Innsbruck: Innsbruck University Press, cop. 2013. Str. 28. Conference series. ISBN 978-3-902936-03-5. [COBISS.SI-ID 3240840]

15. STOJKOVIČ, Katja. Opis mobilnih genetskih elementov in odpornosti proti monenzinu pri bakterijah iz rodov Prevotella in Bacteroides : doktorska disertacija = Characterisation of mobile genetic elements and monensin resistance in bacteria from genera Prevotella and Bacteroides : doctoral dissertation. Ljubljana: [K. Gorenc], 2013. XII, 101 f., ilustr. http://www.dlib.si/details/URN:NBN:SI:doc-ME2A8LJG, Repozitorij Univerze v Ljubljani – RUL. [COBISS.SI-ID 790647]

16. STOJKOVIČ, Katja, ACCETTO, Tomaž, AVGUŠTIN, Gorazd. Mehanizem odpornosti vampnih bakterij iz rodu Prevotella proti ionofornemu antibiotiku menenzinu. V: KUŠAR, Darja (ur.), OCEPEK, Matjaž (ur.). Knjiga povzetkov : kongres SMD 2014. 6. kongres Slovenskega mikrobiološkega društva, 24.-26. september 2014, Bled, Slovenija. Ljubljana: Veterinarska fakulteta, 2014. Str. 167. ISBN 978-961-6199-67-4. [COBISS.SI-ID 3446152]

17. SINGH, Rajesh Kumar, MAURYA, Jay P., AZEEZ, Abdul, MISKOLCZI, Pal, TYLEWICZ, Szymon, STOJKOVIČ, Katja, DELHOMME, Nicolas, BUSOV, Victor B., BHALERAO, Rishikesh P. A genetic network mediating the control of bud break in hybrid aspen. Nature communications. Oct. 2018, vol. 9, str. 1-10, ilustr. ISSN 2041-1723. https://www.nature.com/articles/s41467-018-06696-y.pdf, DOI: 10.1038/s41467-018-06696-y. [COBISS.SI-ID 67681027]

18. AZEEZ, Abdul, ZHAO, Yiru Chen, SINGH, Rajesh Kumar, JORDANOV, Jordan Aleksiev, DASH, Madhumita, MISKOLCZI, Pal, STOJKOVIČ, Katja, STRAUSS, Steven H., BHALERAO, Rishikesh P., BUSOV, Victor B. EARLY BUD-BREAK 1 and EARLY BUD-BREAK 3 control resumption of poplar growth after winter dormancy. Nature communications. Feb. 2021, vol. 12, str. 1-12, ilustr. ISSN 2041-1723. https://www.nature.com/articles/s41467-021-21449-0.pdf, DOI: 10.1038/s41467-021-21449. [COBISS.SI-ID 67675395]