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Mitja Rot

Osebna bibliografija za obdobje 2007-2026

2007

1. ROT, Mitja. Občutljivost izolatov gliv kvasovk za antimikotike osamljenih iz nadzornih kužnin v obdobju 1992-2005 : diplomsko delo, univerzitetni študij = Sensitivity of yeasts for antimicotics isolated from control specimens in years 1992-2005 : graduation thesis, university studies. Ljubljana: [M. Rot], 2007. XII, 56 f., graf. prikazi, tabele. Biotehniška fakulteta, Enota medoddelčnega študija mikrobiologije, Ljubljana, Diplomske naloge, 289. http://www.digitalna-knjiznica.bf.uni-lj.si/dn_rot_mitja.pdf, Repozitorij Univerze v Ljubljani – RUL. [COBISS.SI-ID 3299448]

2012

2. KERN, Izidor, SODJA, Eva, ROT, Mitja. Cyclooxygenase-2 expression in NSCLC. Virchows Archiv, 24th European Congress of Pathology, Prague, 8-12 September 2012. Sep. 2012, vol. 461, suppl. 1, str. s65. ISSN 0945-6317. [COBISS.SI-ID 2048648561]
3. HAJDINJAK, Nina, ROT, Mitja, KERN, Izidor. EGFR mutation testing in cytologycal specimens. Cytopathology. [Print ed.]. 2012, vol. 23, suppl. 1, str. 86. ISSN 0956-5507. [COBISS.SI-ID 30276313]

2014

4. TURNŠEK, Nina, KERN, Izidor, SADIKOV, Aleksander, ROT, Mitja, STANIČ, Karmen, ZWITTER, Matjaž, ČUFER, Tanja. Immunohistochemically determined EGFR mutations in NSCLC. Journal of clinical oncology. [Print ed.]. 2014, vol. 32, suppl. 5, str. [1]. ISSN 0732-183X. http://meetinglibrary.asco.org/content/134428-144. [COBISS.SI-ID 1942651]

2015

5. KERN, Izidor, ROT, Mitja, PALMA, John. Detection of EGFR mutations in tissue and plasma from Slovenian patients with NSCLC prior to and during treatment. Virchows Archiv. Sep. 2015, vol. 467, suppl. 1, str. s43. ISSN 0945-6317. [COBISS.SI-ID 33037017]
6. TURNŠEK, Nina, KERN, Izidor, SADIKOV, Aleksander, ROT, Mitja, STANIČ, Karmen, ZWITTER, Matjaž, ČUFER, Tanja. Immunohistochemically determined EGFR mutations and selection of patients for EGFR-directed therapy in NSCLC. V: A best of ASCO meeting : book of abstracts. Zagreb: Penta, 2015. Str. 49. [COBISS.SI-ID 2152827]
7. KERN, Izidor, ROT, Mitja, PALMA, John. Reproducibility of plasma based detection of EGFR mutations. Virchows Archiv. Sep. 2015, vol. 467, suppl. 1, str. s43. ISSN 0945-6317. [COBISS.SI-ID 33037273]

2016

8. MOHORČIČ, Katja, KERN, Izidor, ROT, Mitja, ČUFER, Tanja. EGFR mutations in circulating tumor DNA (ctDNA) and tissue rebiopsy at progression on treatment with EGFR tyrosine kinase inhibitors (TKI). Journal of thoracic oncology. [Print ed.]. Apr. 2016, vol. 11, iss. 4, str. s123. ISSN 1556-0864. [COBISS.SI-ID 2616187]

2017

9. KERN, Izidor, ROT, Mitja, OMAN, Jerneja, MOHORČIČ, Katja, ČUFER, Tanja, DAS, Partha, et al. 2-year single institution experience with EGFR plasma testing in advanced NSCLC. Journal of thoracic oncology. [Print ed.]. Jan. 2017, vol. 12, iss. s1, str. s253. ISSN 1556-0864. [COBISS.SI-ID 2573691]
10. ROT, Mitja, KERN, Izidor, ČUFER, Tanja, MOHORČIČ, Katja. Detectability of activating and resistance EGFR mutations in plasma. V: Pathology for patient care : abstracts. Berlin; Heidelberg: Springer, 2017. Virchows Archiv, Supplement, vol. 471, suppl. s1. ISSN 1432-2307. https://www.esp-congress.org/scientific-contents/online-programme.html#/details/abstract/982. [COBISS.SI-ID 2749819]
11. MOHORČIČ, Katja, KERN, Izidor, JANŽIČ, Urška, TURNŠEK, Nina, ROT, Mitja, ČUFER, Tanja, et al. Monitoring plasma EGFR mutations during first line treatment with EGFR TKIS in NSCLC patients. Journal of thoracic oncology. [Print ed.]. Jan. 2017, vol. 12, iss. s1, str. s197. ISSN 1556-0864. [COBISS.SI-ID 2572923]

2019

12. MOHORČIČ, Katja, JANŽIČ, Andrej, JANŽIČ, Urška, ROT, Mitja, KERN, Izidor, IASLC 2019 World Conference on Lung Cancer: Conquering Thoracic Cancers Worldwide, Barcelona, 07 September 2019 - 10 September 2019. Monitoring of EGFR mutations during osimertinib treatment in advance EGFR-mutant T790M positive NSCLC. Journal of thoracic oncology. [Print ed.]. Oct. 2019, vol. 14, iss. 10, suppl., str. s557-s558, graf. ISSN 1556-0864. [COBISS.SI-ID 2048609137]
13. EVRARD, Solène M., CLERMONT, Estelle T., ROUQUETTE, Isabelle, MURRAY, Samuel, DINTNER, Sebastian, NAM-APOSTOLOPOULOS, Yun-Chung, BELLOSILLO, Beatriz, RODRIGUEZ, Mar V., NADAL, Ernest, WIEDORN, Klaus H., ROT, Mitja, KERN, Izidor, et al. Multicenter evaluation of the fully automated PCR-based Idylla EGFR Mutation Assay on formalin-fixed, paraffin-embedded Q1 tissue of human lung cancer. The journal of molecular diagnostics. [Online ed.]. Nov. 2019, vol. 21, iss. 6, str. 1010-1024, ilustr. ISSN 1943-7811. https://jmd.amjpathol.org/article/S1525-1578(19)30355-1/pdf, DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, DOI: 10.1016/j.jmoldx.2019.06.010. [COBISS.SI-ID 2048546161]

2021

14. KEPPENS, Cleo, VAN ROYEN, Yann, BRYSSE, Anne, COTTERET, Sophie, HØGDALL, Estrid, KUHLMANN, Tine Plato, O'SULLIVAN, Brendan, PAUWELS, Patrick, PAUWELS, Siegrid, ROT, Mitja, et al. Incidents in molecular pathology : frequency and causes during routine testing. Archives of pathology & laboratory medicine. [Online ed.]. Oct. 2021, vol. 145, iss. 10, str. 1270–1279, ilustr. ISSN 1543-2165. https://meridian.allenpress.com/aplm/article-lookup/doi/10.5858/arpa.2020-0152-OA, DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, DOI: 10.5858/arpa.2020-0152-OA. [COBISS.SI-ID 54257411]

2024

15. MARC-MALOVRH, Mateja, ROT, Mitja, KERN, Izidor. Utility of NGS for molecular profiling of tumors from cell-free DNA in the diagnosis of non-small cell lung cancer (NSCLC). V: KOŠNIK, Mitja (ur.). 8th Slovenian Pneumology, Allergology and Immunology Congress : April 18-19 2024, Four Points by Sheraton Ljubljana Mons. 1st online ed. Golnik: Slovenian Respiratory Society, 2024. Str. 64, ilustr. ISBN 978-961-95041-7-8. https://www.zps-slo.si/wp-content/uploads/2024/05/8th-slovenian-pneumology-allergology-and-immunology-congress-publication.pdf. [COBISS.SI-ID 196685571]

2025

16. MOHORČIČ, Katja, LUŠTRIK, Roman, ROT, Mitja, UHLIK, Mark, KURALT, Žan, AVSEC, Luka. Frequency of driver mutations in early- and late-stage non-small cell lung cancer in Slovenia. V: 21st Central European Lung Cancer Conference and Best of WCLC 2025 : November 27-29, 2025, Budapest, Hungary, November 27-29, 2025 Budapest, Hungary : abstracts. [S. l.: s. n.]. [abstract no.] p10, str. [18]. https://celcc2025.hu/wp-content/uploads/2025/11/Abstracts-CELCC2025-1.pdf. [COBISS.SI-ID 259528963]
17. MOHORČIČ, Katja, LUŠTRIK, Roman, AUSEC, Luka, KERN, Izidor, ROT, Mitja, KURALT, Žan, UHLIK, Mark, BUT-HADŽIĆ, Jasna. The frequency of driver mutations in non-small cell lung cancer patients: Slovenian nationwide observational cohort trial. V: Abstract Book of the ESMO Congress 2025 : 17-21 October 2025. [Oxford]: Elsevier, 2025. [abstract no.] 2051ep, str. s1162. Annals of oncology (Dordrecht. Online), vol. 36, suppl. 2. ISSN 1569-8041. https://www.annalsofoncology.org/article/S0923-7534(25)03593-8/fulltext, DOI: 10.1016/j.annonc.2025.08.2673. [COBISS.SI-ID 261223171]
18. MARC-MALOVRH, Mateja, ADAMIČ, Katja, KERN, Izidor, ROT, Mitja, ROZMAN, Aleš. Utility of NGS for molecular profiling of tumors from cell-free DNA (cfDNA) in the diagnosis of non-small cell lung cancer (NSCLC). V: ERS Congress 2025 abstracts. Lausanne: European Respiratory Society, 2025. Str. pa5008. European respiratory journal (Online), vol. 66, issue suppl. 69. ISSN 1399-3003. https://publications.ersnet.org/content/erj/66/suppl69/pa5008, DOI: 10.1183/13993003.congress-2025.PA5008. [COBISS.SI-ID 259421699]

2026

19. ADAMIČ, Katja, GABRIČ, Simona, KERN, Izidor (avtor, urednik), KOVAČEVIĆ, Mile, ROT, Mitja, VLAČIĆ, Gregor. Citopatologija plevralnega izliva. Golnik: Univerzitetna klinika za pljučne bolezni in alergijo, 2026. ISBN 978-961-6633-74-1. [COBISS.SI-ID 288723971]
20. ADAMIČ, Katja, GABRIČ, Simona, KERN, Izidor (avtor, urednik), KOVAČEVIĆ, Mile, ROT, Mitja, VLAČIĆ, Gregor. Citopatologija plevralnega izliva. 1. elektronska izd. Golnik: Univerzitetna klinika za pljučne bolezni in alergijo, 2026. 1 spletni vir (1 datoteka PDF (78 str.)), ilustr. ISBN 978-961-6633-66-6. https://www.klinika-golnik.si/arhiv-gradiv-zbornikov. [COBISS.SI-ID 230510851]
21. ŠELB, Julij (avtor, korespondenčni avtor), DEJANOVIĆ, Luka, MOHORČIČ, Katja, RIJAVEC, Matija, MARC-MALOVRH, Mateja, JAKOPIČ, Helena, JANŽIČ, Urška, MRAK, Loredana, SEKIRNIK, Rok, ARNAK, Remigiusz, ŠELB, Kristina, POŽEK, Igor, POHAR, Jelka, RUPAR, Nina, ROT, Mitja, SMOLE, Anže, KERN, Izidor, KOROŠEC, Peter. Vardetector: a pure Python package to detect DNA called mutations in aligned RNA reads. Scientific reports. 2026, vol. , issue , [21] str., ilustr. ISSN 2045-2322. https://www.nature.com/articles/s41598-026-57695-9, DOI: 10.1038/s41598-026-57695-9. [COBISS.SI-ID 282967811]
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