Miha Tome

1. TOME, Miha. Vnos agronomsko pomembnih lastnosti z metodo fuzije protoplastov : diplomski seminar = Introduction of significant agricultural traits using protoplast fusion methods : B. Sc. thesis. Ljubljana: [M. Tome], 2010. V, 17 f., preglednice. Biotehniška fakulteta, Študij biotehnologije, Diplomski seminar univerzitetni študij - 1. stopnja, 21. [COBISS.SI-ID 6488953]

2. TOME, Miha. Čezmerno izražanje homologa regulatornega gena ImbU pri aktinomiceti Saccharopolyspora erythraea : magistrsko delo = Overexpression of the regulatory gene homolog ImbU in actinomycetes Saccharopolyspora erythraea : M. Sc. thesis : [Fakultetna Prešernova nagrada BF za leto 2013]. Ljubljana: [M. Tome], 2013. XVIII, 82 f., [9] f. pril., ilustr., preglednice. Biotehniška fakulteta, Študij biotehnologije, Magistrsko delo magistrskega študija - 2. stopnja Biotehnologija, 4. http://www.digitalna-knjiznica.bf.uni-lj.si/biotehnologija/du2_tome_miha.pdf, Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 7688825]

3. KIRM, Benjamin, MAGDEVSKA, Vasilka, TOME, Miha, HORVAT, Marinka, KARNIČAR, Katarina, PETEK, Marko, VIDMAR, Robert, BAEBLER, Špela, JAMNIK, Polona, FUJS, Štefan, HORVAT, Jaka, FONOVIĆ, Marko, TURK, Boris, GRUDEN, Kristina, PETKOVIĆ, Hrvoje, KOSEC, Gregor. SACE_5599, a putative regulatory protein, is involved in morphological differentiation and erythromycin production in Saccharopolyspora erythraea. Microbial cell factories. 2013, vol. 12, str. 126-1-126-15. ISSN 1475-2859. http://www.microbialcellfactories.com/content/12/1/126/abstract, DiRROS - Digital repository of Slovenian research organizations, DOI: 10.1186/1475-2859-12-126. [COBISS.SI-ID 3005775]

4. PETKOVIĆ, Hrvoje, MAGDEVSKA, Vasilka, KIRM, Benjamin, TOME, Miha, HORVAT, Marinka, KARNIČAR, Katarina, PETEK, Marko, VIDMAR, Robert, BAEBLER, Špela, JAMNIK, Polona, FUJS, Štefan, HORVAT, Jaka, FONOVIĆ, Marko, TURK, Boris, GRUDEN, Kristina, KOSEC, Gregor. Identifikacija domnevnega regulatornega proteina, ki je udeležen pri biosintezi eritromicina in diferenciaciji Saccharopolyspora erythraea, z omskimi pristopi. In: KUŠAR, Darja (ed.), OCEPEK, Matjaž (ed.). Knjiga povzetkov : kongres SMD 2014. 6. kongres Slovenskega mikrobiološkega društva, 24.-26. september 2014, Bled, Slovenija. Ljubljana: Veterinarska fakulteta, 2014. Str. 60, pr-21. ISBN 978-961-6199-67-4. [COBISS.SI-ID 3211343]

5. RASPOR, Peter, ZUPAN, Jure, PETELIN, Ana, JENKO PRAŽNIKAR, Zala, POKLAR VATOVEC, Tamara, LIČEN, Sabina, TOME, Miha, KRANJC, Katja, PUCER, Patrik, KARNJUŠ, Igor, BABNIK, Katarina, BARLIČ-MAGANJA, Darja, et al. Poslanstvo na področju (pre)hrane in zdravja. Mlinarstvo in pekarstvo : slovenska strokovna revija za mlinarstvo in pekarstvo. 2014, letn. 15, št. 90, str. 9-13, ilustr. ISSN 1408-581X. [COBISS.SI-ID 1537266116]

6. OGRINEC, Aleš, ZUPAN, Jure, TOME, Miha, ŠERGAN, Matej, ČADEŽ, Neža, KOČAR MLINARIČ, Nataša, RASPOR, Peter. Lab-scale fermentations under industrial-scale conditions : case lager beer. In: MRŠA, Vladimir (ed.), TEPARIĆ, Renata (ed.), KIFER, Domagoj (ed.). Programme and abstracts. Simposium Power of Microbes in Industry and Environment September 28 - October 1, 2016 Krk, Croatia. Zagreb: Croatian Microbiological Society, [2016]. Str. 59, pp7. ISBN 978-953-7778-14-9. [COBISS.SI-ID 4732792]

7. RASPOR, Peter, TOME, Miha, TOMIČIĆ, Ružica, TOMIČIĆ, Zorica, ZUPAN, Jure. Candida glabrata : novel view on treating yeast infections. In: Book of abstracts = Knjiga rezimea. The 6th International Scientific Meeting Mycology, Mycotoxicology, and Mycoses, 27-29 September, 2017, Novi Sad, Serbia = Šesti međunarodni naučni skup mikologija, mikotoksikologija i mikoze, 27-29. septembar 2017., Novi Sad, Srbija. Novi Sad: Matica srpska, 2017. Str. 31. ISBN 978-86-7946-194-0. [COBISS.SI-ID 4845688]

8. ISTEL, Fabian, TOME, Miha, JENULL, Sabrina, KUCHLER, Karl. Phenotypic profiling of Candida glabrata in liquid media. Bio-protocol. Apr. 2017, vol. 7, iss. 7, str. 1-14, [2228], ilustr. ISSN 2331-8325. https://bio-protocol.org/pdf/Bio-protocol2228.pdf, DOI: 10.21769/BioProtoc.2228. [COBISS.SI-ID 4944504]

9. RASPOR, Peter, AVBELJ, Martina, ČADEŽ, Neža, KOSEL, Janez, KRANJC, Luka, SMOLE MOŽINA, Sonja, TOME, Miha, ZUPAN, Jure. Wine : the episode of nature or the consequence of yeast slavery. In: The challenges for quality and safety along the food chain : abstract book. FOOD-3 International Conference, 23 - 25 March 2017, New Bulgarian University, Sofia, Bulgaria. Sofia: New Bulgarian University, 2017. Str. 6-7. http://ebox.nbu.bg/3foodconference/index.html. [COBISS.SI-ID 4772472]

10. TOME, Miha, KRANJC, Luka, OGRINEC, Aleš. Kaj lahko dajo male pivovarne našemu potrošniku?. In: RASPOR, Peter (ed.). [Hrana, prehrana, zdravje] : naša dela so naša prihodnost : [večavtorska monografija]. Ljubljana: Mednarodni inštitut ECPD za trajnostni razvoj, prostorsko načrtovanje in okoljske študije, 2018. Str. 248-262. ISBN 978-961-6992-42-8. [COBISS.SI-ID 4992376]

11. TOME, Miha. Mechanism of azole resistance in Candida glabrata in the presence of immunosuppressant mycophenolic acid : doctoral dissertation = Mehanizem odpornosti proti azolom v kvasovki Candida glabrata v prisotnosti imunosupresiva mikofenolne kisline : doktorska disertacija. Ljubljana: [M. Tome], 2018. XXVIII, 163, [95] str., ilustr. Repository of the University of Ljubljana – RUL , http://www.dlib.si/details/URN:NBN:SI:doc-X3L34GPN. [COBISS.SI-ID 926071]

12. TOME, Miha (interviewee). Od divjih kvasovk in vinskih sodov do zmagovalnega piva : Barut Brewing and Blending, Kamnik. Pet zvezdic : revija za umetnost kuhanja in uživanja ob hrani in pijači. apr. 2018, letn. 25, št. 4, str. 56-58, fotogr. ISSN 1318-2889. [COBISS.SI-ID 5017976]

13. TOME, Miha, ZUPAN, Jure, TOMIČIĆ, Zorica, MATOS, Tadeja, RASPOR, Peter. Synergistic and antagonistic effects of immunomodulatory drugs on the action of antifungals against Candida glabrata and Saccharomyces cerevisiae. PeerJ. 2018, vol. 6, str. 1-23, ilustr. ISSN 2167-8359. DOI: 10.7717/peerj.4999. [COBISS.SI-ID 4941432]

14. TOME, Miha, KRANJC, Luka, OGRINEC, Aleš. Mikrobna biodiverziteta in razvoj novih produktov v butičnem pivovarstvu = Microbial biodiversity and development of new products in craft beer. In: Živilstvo in prehrana med tradicijo in inovacijo = Food science, technology and nutrition between tradition and innovation : 30. Bitenčevi živilski dnevi 2019 = 30th Food Technology Days 2019 dedicated to Prof. F. Bitenc : 19. junij 2019, Ljubljana. 30. Bitenčevi živilski dnevi 2019 = 30th Food Technology Days 2019 dedicated to Prof. F. Bitenc, 19. junij 2019, Ljubljana. 1. elektronska izd. Ljubljana: Biotehniška fakulteta, Oddelek za živilstvo, 2019. Str. 233-245, ilustr. ISBN 978-961-6908-22-1. [COBISS.SI-ID 5071992]

15. TOME, Miha, KRANJC, Luka, OGRINEC, Aleš. Mikrobna biodiverziteta in razvoj novih produktov v butičnem pivovarstvu = Microbial biodiversity and development of new products in craft beer. In: SMOLE MOŽINA, Sonja (ed.), PAŠ, Maja (ed.). Živilstvo in prehrana med tradicijo in inovacijo : zbornik povzetkov = Food science, technology and nutrition between tradition and innovation : book of abstracts. 30. Bitenčevi živilski dnevi 2019 = 30th Food Technology Days 2019 dedicated to Prof. F. Bitenc, 19. junij 2019, Ljubljana. 1. elektronska izd. Ljubljana: Biotehniška fakulteta, Oddelek za živilstvo, 2019. Str. 22. ISBN 978-961-6908-23-8. http://www.bf.uni-lj.si/fileadmin/users/1/zivilstvo/BZD/BZD_2019/BZD_2019__zbornik_povzetkov.pdf. [COBISS.SI-ID 5158520]

16. ČADEŽ, Neža, LIBKIND, Diego, TOME, Miha. Izguba genov kot evolucijska prednost bipolarno brstečih kvasovk. In: JAMNIKAR CIGLENEČKI, Urška (ed.), KUŠAR, Darja (ed.). 8. kongres Slovenskega mikrobiološkega društva : knjiga povzetkov : 23.-25. september 2020 : kongres SMD, 23.-25. 9. 2020 : virtualni kongres. Ljubljana: Slovensko mikrobiološko društvo, 2020. Str. 53. ISBN 978-961-90346-8-2. http://www.smd.si/wp-content/uploads/2020/09/Knjiga-povzetkov_SMD_2020_WEB_koncna_ver3_compressed.pdf. [COBISS.SI-ID 32001027]

17. BAJC, Rok. Metabolizem fenolnih spojin v pivovarskih kvasovkah : diplomsko delo = Metabolism of phenolic compounds by brewer's yeast : B. Sc. thesis. Ljubljana: [R. Bajc], 2020. VIII, 21 str., ilustr. Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 31214083]

18. ČADEŽ, Neža, TOME, Miha. Adaptive evolution at genomic and phenotypic level of the lager strain W34/70 after 30 re-pitchings = Evolución adaptativa a nivel genómico y fenotípico de la cepa lager W34/70 después de 30 reutilizaciones. In: IWOBY 2021 : International Workshop on Brewing Yeasts, 20 y 21 Noviembre 2021, Bariloche, Patagonia, Argentina. Bariloche: Instituto Andino Patagónico de Tecnologías Biológicas y Geoambientales (IPATEC). 2021, str. [1]. https://iwoby.com.ar/. [COBISS.SI-ID 93516547]

19. ČADEŽ, Neža, BELLORA, Nicolas, ULLOA, Ricardo, TOME, Miha, PETKOVIĆ, Hrvoje, GROENEWALD, Marizeth, HITTINGER, Chris Todd, LIBKIND, Diego, et al. Hanseniaspora smithiae sp. nov., a novel apiculate yeast species from patagonian forests that lacks the typical genomic domestication signatures for fermentative environments. Frontiers in microbiology. Jul. 2021, vol. 12, str. 1-11, ilustr. ISSN 1664-302X. https://www.frontiersin.org/articles/10.3389/fmicb.2021.679894/full, Repository of the University of Ljubljana – RUL , DOI: 10.3389/fmicb.2021.679894. [COBISS.SI-ID 72059139]

20. ŠENICA KAVČIČ, Petra. Izboljšava fizioloških lastnosti pivskih kvasovk z usmerjeno evolucijo : magistrsko delo = Improving physiological traits of brewing yeasts with directed evolution : M. Sc. Thesis. Ljubljana: [P. Šenica], 2021. XIII, 63 f., [23] f. pril., ilustr. Biotehniška fakulteta, Magistrski študijski program 2. stopnje Mikrobiologija, 226. Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 70423811]

21. TOME, Miha, LIBKIND, Diego, ČADEŽ, Neža. Non-conventional yeasts in brewing and distilling Hanseniaspora yeasts, the secret bio-flavouring agent – a case of screening for brewing potential = Levaduras Hanseniaspora, los agentes secretos de bioflavoring, un caso de relevamiento de potencial cervecero. In: IWOBY 2021 : International Workshop on Brewing Yeasts, 20 y 21 Noviembre 2021, Bariloche, Patagonia, Argentina. Bariloche: Instituto Andino Patagónico de Tecnologías Biológicas y Geoambientales (IPATEC). 2021, str. [1]. https://iwoby.com.ar/. [COBISS.SI-ID 93517571]

22. ČADEŽ, Neža, DLAUCHY, Dénes, TOME, Miha, PÉTER, Gábor. Novakomyces olei sp. nov., the first member of a novel Taphrinomycotina lineage. Microorganisms. 2021, vol. 9, no. 2, str. 1-20. ISSN 2076-2607. https://www.mdpi.com/2076-2607/9/2/301, Repository of the University of Ljubljana – RUL , DOI: 10.3390/microorganisms9020301. [COBISS.SI-ID 49990915]

23. ČADEŽ, Neža, TOME, Miha, HITTINGER, Chris Todd, LIBKIND, Diego. Speciation of Hanseniaspora species through loss and gain of genes. In: The spirit of yeast : Programme & abstracts : ICY 15 (International Congress on Yeasts) meets ICYGMB 30 (International Conference on Yeast Genetics and Molecular Biology), August 23-27 2021, Vienna. Boku: Univ. Natural Resources and Life Sciences, 2021. Str. 38. https://icy15.boku.ac.at/. [COBISS.SI-ID 79743747]

24. ULAGA, Marjeta. Ovrednotenje vpliva genetskih sprememb na fenotip zaporedno uporabljene pivske kvasovke Saccharomyces pastorianus : magistrsko delo = Evaluation of genetic changes on phenotype of serially repitched brewing yeast Saccharomyces pastorianus : M. Sc. thesis. Ljubljana: [M. Ulaga], 2022. 1 spletni vir (1 datoteka PDF (XI, 56 f., [2] f. pril.)), ilustr. Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 135691267]

25. PAVLIHA, Eva. Prilagoditev izolatov kvasovk iz Vipavske doline za fermentacijo pivine z usmerjeno evolucijo : magistrsko delo = Adaptation of yeast isolates from Vipava valley for wort fermentation with directed evolution : M. Sc. Thesis. Ljubljana: [E. Pavliha], 2022. XII, 57 f., [20] f. pril., ilustr. Biotehniška fakulteta, Magistrski študijski program 2. stopnje Mikrobiologija, 260. Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 114790659]

26. SLEMC, Lucija, JAKŠE, Jernej, FILISETTI, Alessandro, BARANASIC, Damir, RODRÍGUEZ GARCÍA, Antonio, DEL CARRATORE, Francesco, MARINO, Stefano Maria, ZUCKO, Jurica, STARČEVIĆ, Antonio, ŠALA, Martin, PÉREZ-BONILLA, Mercedes, SÁNCHEZ-HIDALGO, Marina, GONZÁLEZ, Ignacio, REYES, Fernando, GENILLOUD, Olga, SPRINGTHORPE, Vicki, GORANOVIČ, Dušan, KOSEC, Gregor, THOMAS, Gavin, DE LUCREZIA, Davide, PETKOVIĆ, Hrvoje, TOME, Miha. Reference-grade genome and large linear plasmid of streptomyces rimosus: pushing the limits of nanopore sequencing. Microbiology spectrum. [Spletna izd.]. Mar./Apr. 2022, vol. 10, iss. 2, str. 1-20, ilustr. ISSN 2165-0497. https://journals.asm.org/doi/10.1128/spectrum.02434-21, DOI: 10.1128/spectrum.02434-21. [COBISS.SI-ID 103836931]
project: H2020 TOPCAPI Thoroughly optimised production chassis for advanced pharmaceutical ingredients; funder: EU
project: P4-0116 Mikrobiologija in biotehnologija živil in okolja; funder: ARRS
project: P4-0077 Kmetijske rastline - genetika in sodobne tehnologije; funder: ARRS
project: P1-0034 Analitika in kemijska karakterizacija materialov ter procesov; funder: ARRS
project: MR; funder: ARRS
project: C3330-19-952047; funder: Republic of Slovenia Ministry of Education, Science and Sport
project: European Regional Development Fund; funder: EU

27. RUŽIČ, Katja. Sprememba fenotipa asimilacije sladkorjev v lokalnih izolatih kvasovk z usmerjeno evolucijo : magistrsko delo = Change of the sugar assimilation phenotype in local yeast isolates with directed evolution : M. Sc. Thesis. Ljubljana: [K. Ružič], 2022. 1 spletni vir (1 datoteka PDF (XI, 48 str., [11] f. pril.)), ilustr. Biotehniška fakulteta, Magistrski študijski program 2. stopnje Mikrobiologija, 262. Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 119742723]

28. STERGAR, Ela. Fermentacijske lastnosti monospornih mutant pivskih kvasovk z izboljšanim sprejemom maltoze : magistrsko delo = Fermentation capacity of monospore beer yeast mutants with improved maltose utilisation : M. Sc. Thesis. Ljubljana: [E. Stergar], 2023. 1 spletni vir (1 datoteka PDF (XI, 56 str., [5] f. pril.)), ilustr. Biotehniška fakulteta, Magistrski študijski program 2. stopnje Mikrobiologija, 307. Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 167599875]

29. TOME, Miha, ŠENICA KAVČIČ, Petra, NEMEC, Anže, PAVLIHA, Eva, RUŽIČ, Katja, ČADEŽ, Neža, PETKOVIĆ, Hrvoje. Prilagoditev lokalnih izolatov kvasovk za proizvodnjo piva – usmerjena evolucija in genomika. In: PETKOVIĆ, Hrvoje (ed.). Letno srečanje programske skupine Mikrobiologija in biotehnologija živil in okolja (P4-0116) : Biotehniška fakulteta, Univerza v Ljubljani, Slovenija, Ljubljana, 3. 2. 2023. Ljubljana: Univerza v Ljubljani, Biotehniška fakulteta, Oddelek za živilstvo, 2023. Str. 15, ilustr. [COBISS.SI-ID 140904963]

30. JOZEF, Barbara, MOSIMANN, Sven, TOME, Miha, ŽUPANIČ, Anže, SCHIRMER, Kristin. Image-based phenotypic profiling of fish gill cells undergoing chemical exposure. In: 22nd International Congress ESTIV [European Society of Toxicology In Vitro] : abstract book : Prague 2024, 3-6 June. [S. l.: s. n., 2024]. Str. 167-168. https://www.estiv.org/congress2024/abstract-book/. [COBISS.SI-ID 199489539]

31. PŠENIČNIK, Alen, SLEMC, Lucija, AVBELJ, Martina, TOME, Miha, ŠALA, Martin, HERRON, Paul R., SHMATKOV, Maksym, PETEK, Marko, BAEBLER, Špela, MRAK, Peter, HRANUELI, Daslav, STARČEVIĆ, Antonio, HUNTER, Iain S., PETKOVIĆ, Hrvoje. Nov pristop za izboljšanje produkcije antibiotika oksitetraciklina s tarčno redukcijo genoma bakterije Streptomyces rimosus. In: KUŠAR, Darja (ed.), JAMNIKAR CIGLENEČKI, Urška (ed.). 9. kongres Slovenskega mikrobiološkega društva : knjiga povzetkov : 14.–16. februar 2024. Ljubljana: Slovensko mikrobiološko društvo, 2024. Str. 41. ISBN 978-961-96562-0-4. https://smd2024.si/wp-content/uploads/2024/02/2024-02-12-knjiga-povzetkov-SMD_Compress.pdf. [COBISS.SI-ID 186106115]

32. PŠENIČNIK, Alen, SLEMC, Lucija, AVBELJ, Martina, TOME, Miha, ŠALA, Martin, HERRON, Paul R., SHMATKOV, Maksym, PETEK, Marko, BAEBLER, Špela, MRAK, Peter, HRANUELI, Daslav, STARČEVIĆ, Antonio, HUNTER, Iain S., PETKOVIĆ, Hrvoje. Oxytetracycline hyper-production through targeted genome reduction of Streptomyces rimosus. mSystems. May 2024, vol. 9, iss.5, str. 1-30, ilustr. ISSN 2379-5077. https://journals.asm.org/doi/10.1128/msystems.00250-24, DiRROS - Digital repository of Slovenian research organizations, Repository of the University of Ljubljana – RUL , DOI: 10.1128/msystems.00250-24. [COBISS.SI-ID 191381251]

33. STERNIŠA, Meta, BREBERINA, Mia, TOME, Miha, SMOLE MOŽINA, Sonja. Antimicrobial resistance and biofilm formation in Pseudomonas spp. from spoiled meat and fish: focus on carbapenem resistance. In: MARAVIĆ VLAHOVIČEK, Gordana (ed.). 7th Central European Symposium on Antimicrobials and Antimicrobial Resistance : CESAR2025 : programme and abstracts : 22-25 September 2025 : Zadar, Croatia. Zagreb: Croatian Microbiological Society, 2025. Str. 54. ISBN 978-953-7778-21-7. [COBISS.SI-ID 251908611]
award: Best poster award

34. TOME, Miha, JOZEF, Barbara, MOSIMANN, Sven, SCHIRMER, Kristin, ŽUPANIČ, Anže. A data analysis pipeline for high-content bioimage phenotyping in toxicology: development and applications. In: Innovation for tomorrow : progress in safe and sustainable concepts : SETAC 35th Annual Meeting : 11-15 May 2025, Vienna, Austria : abstract book. Brussels: SETAC Europe, cop. 2025. Str. 64. Abstract book (SETAC Europe Annual Meeting. Online). ISSN 2310-3043. https://www.setac.org/asset/DD926041%2DA27E%2D475C%2DB4DD95B68EE24911/. [COBISS.SI-ID 238620931]

35. STERNIŠA, Meta, BREBERINA, Mia, TOME, Miha, SMOLE MOŽINA, Sonja. Fluorescent phenotype drives resistance traits and biofilm formation in Pseudomonas isolated from spoiled meat. In: SIMÕES, Manuel (ed.). Book of abstracts : e–Conference on Innovation in Microbial Control 2025 : November 19th, 2025. Porto: Faculty of Engineering of University of Porto, 2025. Str. 12. ISBN 978-972-752-352-8. https://207095776c.cbaul-cdnwnd.com/3812f4f1aaa65c3c5c18e07f6bb3e18b/200000112-2a0592a087/AbstractBook_e_conferenceAMR2025.pdf?ph=207095776c. [COBISS.SI-ID 263732483]

36. PODGORŠEK, Martina, DOBERŠEK, Katja, PAŠ, Maja, TOME, Miha, OCVIRK, Miha, PETROVIČ, Uroš, KOŠIR, Iztok Jože, ČADEŽ, Neža. Genomic adaptation of an autochthonous cider yeast strain to buckwheat and barley wort under stressful brewing conditions. Applied and environmental microbiology. Nov. 2025, vol. 91, issue 11, str. 1-19, ilustr. ISSN 1098-5336. https://journals.asm.org/doi/10.1128/aem.01015-25, DOI: 10.1128/aem.01015-25. [COBISS.SI-ID 253302019]

37. NEMEC, Anže. Genomska analiza polimorfizmov mutant lokalnega izolata kvasovke Lachanchea thermotolerans s spremenjenim fenotipom privzema sladkorjev : magistrsko delo = Genomic analysis of polymorphisms in mutants with altered sugar metabolism that were acquired from a local yeast isolate of Lachanchea thermotolerans : M. Sc. Thesis. Ljubljana: [A. Nemec], 2025. 1 spletni vir (1 datoteka PDF (XI, 55 str., [44] str. pril.)), ilustr. https://repozitorij.uni-lj.si/Dokument.php?id=201008&lang=slv, Repository of the University of Ljubljana – RUL . [COBISS.SI-ID 230249731]

38. STERNIŠA, Meta, SMOLE MOŽINA, Sonja, TOME, Miha. Orthogroups of spoilage Pseudomonas – elucidation of spoilage phenotypic variations. In: NADIŽAR, Nejc (ed.). 20th CFGBC Symposium : book of abstracts : Slovenia, 11th – 12th June 2025. Electronic version. Ljubljana: University of Ljubljana, Faculty of Medicine, 2025. Str. 83. http://cfgbc.mf.uni-lj.si/wp-content/uploads/2025cfgbcsym20_bookofabstracts.pdf. [COBISS.SI-ID 239235075]

39. MOSIMANN, Sven, JOZEF, Barbara, TOME, Miha, ŽUPANIČ, Anže, SCHIRMER, Kristin. Towards mechanistic understanding of reduced cell proliferation: an RNA- and RIBOseq approach. In: Innovation for tomorrow : progress in safe and sustainable concepts : SETAC 35th Annual Meeting : 11-15 May 2025, Vienna, Austria : abstract book. Brussels: SETAC Europe, cop. 2025. Str. 23. Abstract book (SETAC Europe Annual Meeting. Online). ISSN 2310-3043. https://www.setac.org/asset/DD926041%2DA27E%2D475C%2DB4DD95B68EE24911/. [COBISS.SI-ID 238620675]

40. AVBELJ, Martina, SLEMC, Lucija, PŠENIČNIK, Alen, ZVER, Špela, LAZOVA, Anastasija, MERVIČ, Kristina, SARIM, Khan Mohammad, PAŠ, Maja, STARČEVIĆ, Antonio, ŠALA, Martin, TOME, Miha, VUJAKLIJA, Dušica, PETKOVIĆ, Hrvoje. Modulating complex secondary metabolism in Streptomyces rimosus by targeted genome engineering. Food technology and biotechnology : journal of the Faculty of Food Technology and Biotechnology University of Zagreb. Jan./Mar. 2026, vol. 64, no. 1, str. 97-112, ilustr. ISSN 1330-9862. DOI: 10.17113/ftb.64.01.26.9441. [COBISS.SI-ID 271539971]

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