dr. Tomaž Vrtovec [23404]

1. DASCALU, Tudor, RAMEZANZADE, Shaqayeq, BAKHSHANDEH, Azam, BJØRNDAL, Lars, IURCOV, Raluca, VRTOVEC, Tomaž, IBRAGIMOV, Bulat. DentAssignNet : assignment network for dental cast labeling in the presence of dental abnormalities. IEEE journal of biomedical and health informatics. [Online ed.]. 2025, vol. , iss. , 11 str., ilustr. ISSN 2168-2208. https://ieeexplore.ieee.org/document/10935619, DOI: 10.1109/JBHI.2025.3549685. [COBISS.SI-ID 230531587]

2. AMIRI, Sepideh, KARIMZADEH, Reza, VRTOVEC, Tomaž, GUDMANN STEUBLE BRANDT, Erik, THOMSEN, Henrik S., ANDERSEN, Michael Brun, MÜLLER, Christoph Felix, RODELL, Anders Bertil, IBRAGIMOV, Bulat. Centerline-guided reinforcement learning model for pancreatic duct identifications. Journal of medical imaging. 2024, iss. 6, [article no.] 064002, vol. 11, 16 str., ilustr. ISSN 2329-4310. https://www.spiedigitallibrary.org/journals/journal-of-medical-imaging/volume-11/issue-6/064002/Centerline-guided-reinforcement-learning-model-for-pancreatic-duct-identifications/10.1117/1.JMI.11.6.064002.short, DOI: 10.1117/1.JMI.11.6.064002. [COBISS.SI-ID 215157763]

3. PODOBNIK, Gašper, IBRAGIMOV, Bulat, PETERLIN, Primož, STROJAN, Primož, VRTOVEC, Tomaž. vOARiability : interobserver and intermodality variability analysis in OAR contouring from head and neck CT and MR images. Medical physics. [Print ed.]. Mar. 2024, vol. 51, no. 3, str. 2175-2186, ilustr. ISSN 0094-2405. https://aapm.onlinelibrary.wiley.com/doi/10.1002/mp.16924, DOI: 10.1002/mp.16924. [COBISS.SI-ID 181670147]

4. AMIRI, Sepideh, VRTOVEC, Tomaž, MUSTAFAEV, Tamerlan, DEUFEL, Christopher L., THOMSEN, Henrik S., HYLLEHOLT SILLESEN, Martin, GUDMANN STEUBLE BRANDT, Erik, ANDERSEN, Michael Brun, MÜLLER, Christoph Felix, IBRAGIMOV, Bulat. Reinforcement learning-based anatomical maps for pancreas subregion and duct segmentation. Medical physics. [Online ed.]. Okt. 2024, vol. 51, iss. 10, str. 7378-7392, ilustr. ISSN 2473-4209. https://aapm.onlinelibrary.wiley.com/doi/10.1002/mp.17300, Repozitorij Univerze v Ljubljani – RUL, DOI: 10.1002/mp.17300. [COBISS.SI-ID 202626819]

5. PODOBNIK, Gašper, IBRAGIMOV, Bulat, TAPPEINER, Elias, LEE, Chanwoong, SUNG KIM, Jin, MESBAH, Zacharia, MODZELEWSKI, Romain, MA, Yihao, YANG, Fan, RUDECKI, Mikołaj, WODZIŃSKI, Marek, PETERLIN, Primož, STROJAN, Primož, VRTOVEC, Tomaž. HaN-Seg : the head and neck organ-at-risk CT and MR segmentation challenge. Radiotherapy and oncology. Sep. 2024, vol. 198, [articel no.] 110410, 8 str., ilustr. ISSN 1879-0887. https://www.sciencedirect.com/science/article/pii/S0167814024006807, Repozitorij Univerze v Ljubljani – RUL, DOI: 10.1016/j.radonc.2024.110410. [COBISS.SI-ID 202738179]

6. PODOBNIK, Gašper, STROJAN, Primož, PETERLIN, Primož, IBRAGIMOV, Bulat, VRTOVEC, Tomaž. HaN-Seg : the head and neck organ-at-risk CT & MR segmentation dataset. Medical physics. [Print ed.]. Mar. 2023, vol. 50, no. 3, str. 1917–1927, ilustr. ISSN 0094-2405. https://aapm.onlinelibrary.wiley.com/doi/10.1002/mp.16197, Repozitorij Univerze v Ljubljani – RUL, DOI: 10.1002/mp.16197. [COBISS.SI-ID 136767491]

7. ALUKAEV, Denis, KISELEV, Semen, MUSTAFAEV, Tamerlan, AINUR, Ahatov, IBRAGIMOV, Bulat, VRTOVEC, Tomaž. A deep learning framework for vertebral morphometry and Cobb angle measurement with external validation. European spine journal. Aug. 2022, vol. 31, iss. 8, str. 2115-2124, ilustr. ISSN 0940-6719. https://link.springer.com/article/10.1007/s00586-022-07245-4, DOI: 10.1007/s00586-022-07245-4. [COBISS.SI-ID 109041923]

8. BEKKOUCH, Imad Eddine Ibrahim, MAKSUDOV, Bulat, KISELEV, Semen, MUSTAFAEV, Tamerlan, VRTOVEC, Tomaž, IBRAGIMOV, Bulat. Multi-landmark environment analysis with reinforcement learning for pelvic abnormality detection and quantification. Medical image analysis. May 2022, vol. 78, 102417, str. 1-14, ilustr. ISSN 1361-8415. https://www.sciencedirect.com/science/article/pii/S1361841522000688, DOI: 10.1016/j.media.2022.102417. [COBISS.SI-ID 100730883]

9. KOREZ, Robert, PUTZIER, Michael, VRTOVEC, Tomaž. A deep learning tool for fully automated measurements of sagittal spinopelvic balance from X-ray images : performance evaluation. European spine journal. Sep. 2020, vol. 29, no. 9, str. 2295-2305, ilustr. ISSN 0940-6719. https://link.springer.com/article/10.1007/s00586-020-06406-7, DOI: 10.1007/s00586-020-06406-7. [COBISS.SI-ID 12999764]

10. KNEZ, Dejan, VRTOVEC, Tomaž. Computerized three-dimensional pedicle morphometry from computed tomography images of the thoracic spine. Image analysis & stereology : official journal of the International Society for Stereology. [Tiskana izd.]. Jun. 2020, vol. 39, no. 2, str. 101-109, vii, ilustr. ISSN 1580-3139. https://www.ias-iss.org/ojs/IAS/article/view/2349/1124, Digitalna knjižnica Slovenije - dLib.si, DOI: 10.5566/ias.2349. [COBISS.SI-ID 18613763]

11. KHOLIAVCHENKO, M., SIRAZITDINOV, I., KUBRAK, K., BADRUTDINOVA, R., KULEEV, R., YUAN, Y., VRTOVEC, Tomaž, IBRAGIMOV, Bulat. Contour-aware multi-label chest X-ray organ segmentation. International journal of computer assisted radiology and surgery : a journal for interdisciplinary research, developemnt and applications of image guided diagnosis and therapy. Apr. 2020, vol. 15, iss. 4, str. 425-436, ilustr. ISSN 1861-6410. https://link.springer.com/article/10.1007/s11548-019-02115-9, DOI: 10.1007/s11548-019-02115-9. [COBISS.SI-ID 12875604]

12. BRINK, Rob C., VAVRUCH, Ludvig, SCHLÖSSER, Tom P. C., ABUL-KASIM, Kasim, OHLIN, Acke, TROPP, Hans, CASTELEIN, René M., VRTOVEC, Tomaž. Three-dimensional pelvic incidence is much higher in (thoraco)lumbar scoliosis than in controls. European spine journal. Mar. 2019, vol. 28, no. 3, str. 544-550, ilustr. ISSN 0940-6719. https://link.springer.com/article/10.1007/s00586-018-5718-6, DOI: 10.1007/s00586-018-5718-6. [COBISS.SI-ID 12139092]

13. KNEZ, Dejan, NAHLE, Imad S., VRTOVEC, Tomaž, PARENT, Stefan, KADOURY, Samuel. Computer-assisted pedicle screw trajectory planning using CT-inferred bone density : a demonstration against surgical outcomes. Medical physics. [Print ed.]. Aug. 2019, vol. 46, no. 8, str. 3543-3554, ilustr. ISSN 0094-2405. https://aapm.onlinelibrary.wiley.com/doi/10.1002/mp.13585, DOI: 10.1002/mp.13585. [COBISS.SI-ID 12506964]

14. PINHEIRO, Alan Petrônio, COELHO, Júlio Cézar, PASCHOARELLI VEIGA, Antônio C., VRTOVEC, Tomaž. A computerized method for evaluating scoliotic deformities using elliptical pattern recognition in X-ray spine images. Computer methods and programs in biomedicine. [Print ed.]. Jul. 2018, vol. 161, str. 85-92, ilustr. ISSN 0169-2607. https://www.sciencedirect.com/science/article/pii/S0169260718300105, DOI: 10.1016/j.cmpb.2018.04.015. [COBISS.SI-ID 12018516]

15. PETKOVIĆ, Uroš, KOREZ, Robert, PARENT, Stefan, KADOURY, Samuel, VRTOVEC, Tomaž. Polavtomatsko merjenje 3D Cobbovega kota na trikotniški mreži modela hrbtenice. Elektrotehniški vestnik. [Slovenska tiskana izd.]. 2018, letn. 85, št. 1/2, str. 1-6, ilustr. ISSN 0013-5852. http://ev.fe.uni-lj.si/1-2-2018/Petkovic.pdf, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 12018004]

16. VRTOVEC, Tomaž. Image analysis & stereology : 2017 research highlights. Image analysis & stereology : official journal of the International Society for Stereology. [Tiskana izd.]. Mar. 2018, vol. 37, no. 1, str. 1-7, iii, ilustr. ISSN 1580-3139. https://www.ias-iss.org/ojs/IAS/article/view/1916, Digitalna knjižnica Slovenije - dLib.si, DOI: 10.5566/ias.1916. [COBISS.SI-ID 12006484]

17. MOČNIK, Domen, IBRAGIMOV, Bulat, XING, Lei, STROJAN, Primož, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Segmentation of parotid glands from registered CT and MR images. Physica medica. Aug. 2018, vol. 52, str. 33-41, ilustr. ISSN 1120-1797. https://www.sciencedirect.com/science/article/pii/S1120179718304940, DOI: 10.1016/j.ejmp.2018.06.012. [COBISS.SI-ID 12068692]

18. KNEZ, Dejan, MOHAR, Janez, CIRMAN, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Variability analysis of manual and computer-assisted preoperative thoracic pedicle screw placement planning. Spine. Nov. 1, 2018, vol. 43, no. 21, str. 1487-1495, ilustr. ISSN 0362-2436. https://journals.lww.com/spinejournal/Abstract/publishahead/Variability_Analysis_of_Manual_and.95072.aspx, DOI: 10.1097/BRS.0000000000002659. [COBISS.SI-ID 11993172]

19. KOREZ, Robert, PUTZIER, Michael, VRTOVEC, Tomaž. Računalniško podprto merjenje parametrov sagitalne orientacije medenice iz rentgenskih slik = Computer-assisted measurement of sagittal pelvic alignment parameters from radiographic images. Zdravniški vestnik : glasilo Slovenskega zdravniškega društva. [Tiskana izd.]. nov./dec. 2018, letn. 87, št. 11/12, str. 519-529, ilustr. ISSN 1318-0347. https://vestnik.szd.si/index.php/ZdravVest/article/view/2829, Digitalna knjižnica Slovenije - dLib.si, DOI: 10.6016/ZdravVestn.2829. [COBISS.SI-ID 12351572]

20. IBRAGIMOV, Bulat, KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, XING, Lei, VRTOVEC, Tomaž. Segmentation of pathological structures by landmark-assisted deformable models. IEEE transactions on medical imaging. Jul. 2017, vol. 36, no. 7, str. 1457-1469, ilustr. ISSN 0278-0062. http://ieeexplore.ieee.org/document/7983348/, DOI: 10.1109/TMI.2017.2667578. [COBISS.SI-ID 11684692]

21. VODIČAR, Miha, KOŠAK, Robert, GORENŠEK, Matevž, KOREZ, Robert, VRTOVEC, Tomaž, KODER, Jadran, ANTOLIČ, Vane, VENGUST, Rok. Vertebral end-plate perforation for intervertebral disc height preservation after single-level lumbar discectomy : a randomized-controlled trial. Journal of spinal disorders & techniques. Jul. 2017, vol. 30, no. 6, str. e707-e712, ilustr. ISSN 1539-2465. http://journals.lww.com/jspinaldisorders/Abstract/publishahead/Vertebral_End_Plate_Perforation_for_Intervertebral.99087.aspx, DOI: 10.1097/BSD.0000000000000305. [COBISS.SI-ID 11062612]

22. ZHENG, Guoyan, IBRAGIMOV, Bulat, KOREZ, Robert, VRTOVEC, Tomaž, et al. Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data : a grand challenge. Medical image analysis. Jan. 2017, vol. 35, str. 327-344, ilustr. ISSN 1361-8415. http://www.sciencedirect.com/science/article/pii/S1361841516301530, DOI: 10.1016/j.media.2016.08.005. [COBISS.SI-ID 11470676]

23. SCHLÖSSER, Tom P. C., JANSSEN, Michiel M. A., HOGERVORST, Tom, VRTOVEC, Tomaž, DE VOS, John, ÖNER, F. Cumhur, CASTELEIN, René M. The odyssey of sagittal pelvic morphology during human evolution : a perspective on different hominoidae. The spine journal. Aug. 2017, vol. 17, no. 8, str. 1202-1206, ilustr. ISSN 1529-9430. http://www.sciencedirect.com/science/article/pii/S1529943017301110, DOI: 10.1016/j.spinee.2017.03.016. [COBISS.SI-ID 11711060]

24. KNEZ, Dejan, MOHAR, Janez, CIRMAN, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Manual and computer-assisted pedicle screw placement plans : a quantitative comparison. V: YAO, Jianhua (ur.), et al. Computational methods and clinical applications for spine imaging : revised selected papers. 4th International Workshop and Challenge, CSI 2016, held in conjunction with MICCAI 2016, Athens, Greece, October 17, 2016. Cham: Springer, cop. 2016. Str. 105-115, ilustr. Lecture notes in computer science, 10182. ISBN 978-3-319-55049-7. ISSN 0302-9743. http://link.springer.com/chapter/10.1007/978-3-319-55050-3_10, DOI: 10.1007/978-3-319-55050-3_10. [COBISS.SI-ID 11708244]

25. KNEZ, Dejan, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Automated pedicle screw size and trajectory planning by maximization of fastening strength. V: VRTOVEC, Tomaž (ur.), et al. Computational methods and clinical applications for spine imaging : revised selected papers. Third International Workshop and Challenge, CSI 2015 held in conjunction with MICCAI 2015 Munich, Germany, October 5, 2015. [Cham]: Springer, cop. 2016. Str. 3-13, ilustr. Lecture notes in computer science, 9402. ISBN 978-3-319-41826-1. ISSN 0302-9743. http://link.springer.com/chapter/10.1007/978-3-319-41827-8_1, DOI: 10.1007/978-3-319-41827-8_1. [COBISS.SI-ID 11453012]

26. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Deformable model-based segmentation of intervertebral discs from MR spine images by using the SSC descriptor. V: VRTOVEC, Tomaž (ur.), et al. Computational methods and clinical applications for spine imaging : revised selected papers. Third International Workshop and Challenge, CSI 2015 held in conjunction with MICCAI 2015 Munich, Germany, October 5, 2015. [Cham]: Springer, cop. 2016. Str. 117-124, ilustr. Lecture notes in computer science, 9402. ISBN 978-3-319-41826-1. ISSN 0302-9743. http://link.springer.com/chapter/10.1007/978-3-319-41827-8_11, DOI: 10.1007/978-3-319-41827-8_11. [COBISS.SI-ID 11482196]

27. YAO, Jianhua, BURNS, Joseph E., FORSBERG, Daniel, SEITEL, Alexander, RASOULIAN, Abtin, ABOLMAESUMI, Purang, HAMMERNIK, Kerstin, URSCHLER, Martin, IBRAGIMOV, Bulat, KOREZ, Robert, VRTOVEC, Tomaž, CASTRO-MATEOS, Isaac, POZO, Jose M., FRANGI, Alejandro F., SUMMERS, Ronald Marc, LI, Shuo, et al. A multi-center milestone study of clinical vertebral CT segmentation. Computerized Medical Imaging and Graphics. [Print ed.]. Apr. 2016, vol. 49, str. 16-28, ilustr. ISSN 0895-6111. http://www.sciencedirect.com/science/article/pii/S0895611115001937, DOI: 10.1016/j.compmedimag.2015.12.006. [COBISS.SI-ID 11246164]

28. KNEZ, Dejan, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Computer-assisted screw size and insertion trajectory planning for pedicle screw placement surgery. IEEE transactions on medical imaging. Jun. 2016, vol. 35, no. 6, str. 1420-1430, ilustr. ISSN 0278-0062. http://ieeexplore.ieee.org/document/7372436/, DOI: 10.1109/TMI.2016.2514530. [COBISS.SI-ID 11250260]

29. WANG, Ching-Wei, IBRAGIMOV, Bulat, VRTOVEC, Tomaž, et al. A benchmark for comparison of dental radiography analysis algorithms. Medical image analysis. Jul. 2016, vol. 31, str. 63-76, ilustr. ISSN 1361-8415. http://www.sciencedirect.com/science/article/pii/S1361841516000190, DOI: 10.1016/j.media.2016.02.004. [COBISS.SI-ID 11301716]

30. KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Model-based segmentation of vertebral bodies from MR images with 3D CNNs. V: OURSELIN, Sébastien (ur.), et al. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 : proceedings, part II. 19th International Conference Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, Athens, Greece, October 17-21, 2016. Cham: Springer, cop. 2016. Str. 433-441, ilustr. Lecture notes in computer science, 9901. ISBN 978-3-319-46722-1. ISSN 0302-9743. http://link.springer.com/chapter/10.1007%2F978-3-319-46723-8_50, DOI: 10.1007/978-3-319-46723-8_50. [COBISS.SI-ID 11599188]

31. KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Joint detection and segmentation of vertebral bodies in CT images by sparse representation error minimization. V: STYNER, Martin Andreas (ur.), ANGELINI, Elsa D. (ur.). Medical Imaging 2016. Image Processing. Medical Imaging 2016, Image Processing, San Diego, CA, United States, 27 February - 3 March 2016. [Bellingham: SPIE], 2016. Str. 1-6, ilustr. Proceedings of SPIE, vol. 9784. ISBN 978-1-5106-0019-5. ISSN 0277-786X. http://spie.org/Publications/Proceedings/Paper/10.1117/12.2217087?origin_id=x4325&start_volume_number=9700, DOI: 10.1117/12.2217087. [COBISS.SI-ID 11351636]

32. KNEZ, Dejan, MOHAR, Janez, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Quantitative comparison between the straight-forward and anatomical insertion technique for pedicle screw placement. V: STYNER, Martin Andreas (ur.), ANGELINI, Elsa D. (ur.). Medical Imaging 2016. Image Processing. Medical Imaging 2016, Image Processing, San Diego, CA, United States, 27 February - 3 March 2016. [Bellingham: SPIE], 2016. Str. 1-6, ilustr. Proceedings of SPIE, vol. 9784. ISBN 978-1-5106-0019-5. ISSN 0277-786X. http://spie.org/Publications/Proceedings/Paper/10.1117/12.2216028?origin_id=x4325&start_volume_number=9700, DOI: 10.1117/12.2216028. [COBISS.SI-ID 11316820]

33. KNEZ, Dejan, MOHAR, Janez, CIRMAN, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Določanje velikosti in vstavitvene trajektorije pedikularnih vijakov v računalniškotomografskih (CT) slikah deformacij prsne hrbtenice : primerjava ročnega in računalniško podprtega predoperacijskega načrtovanja = Determination of the pedicle screw size and trajectory in CT images of thoracic spinal deformities : a comparison between manual and computer-assisted preoperative planning. Zdravniški vestnik : glasilo Slovenskega zdravniškega društva. [Tiskana izd.]. nov./dec. 2016, letn. 85, št. 11/12, str. 619-631, ilustr. ISSN 1318-0347. http://vestnik.szd.si/index.php/ZdravVest/article/view/1747, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 11678804]

34. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. A framework for automated spine and vertebrae interpolation-based detection and model-based segmentation. IEEE transactions on medical imaging. Aug. 2015, vol. 34, no. 8, str. 1649-1662, ilustr. ISSN 0278-0062. http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=7004869, DOI: 10.1109/TMI.2015.2389334. [COBISS.SI-ID 10904660]

35. WANG, Ching-Wei, VRTOVEC, Tomaž, IBRAGIMOV, Bulat, et al. Evaluation and comparison of anatomical landmark detection methods for cephalometric X-ray images : a grand challenge. IEEE transactions on medical imaging. Sep. 2015, vol. 34, no. 9, str. 1890-1900, ilustr. ISSN 0278-0062. http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=7061486, DOI: 10.1109/TMI.2015.2412951. [COBISS.SI-ID 10965332]

36. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Variability of manual and computerized methods for measuring coronal vertebral inclination in computed tomography images. Image analysis & stereology : official journal of the International Society for Stereology. [Tiskana izd.]. nov. 2015, vol. 34, no. 3, str. 199-208, ilustr. ISSN 1580-3139. http://www.ias-iss.org/ojs/IAS/article/view/1334, Digitalna knjižnica Slovenije - dLib.si, DOI: 10.5566/ias.1334. [COBISS.SI-ID 11062868]

37. MARTINČIČ, David, BROJAN, Miha, KOSEL, Franc, ŠTERN, Darko, VRTOVEC, Tomaž, ANTOLIČ, Vane, VENGUST, Rok. Minimum cement volume for vertebroplasty. International orthopaedics. Apr. 2015, vol. 39, no. 4, str. 727-733, ilustr. ISSN 0341-2695. https://link.springer.com/article/10.1007%2Fs00264-014-2620-7, DOI: 10.1007/s00264-014-2620-7. [COBISS.SI-ID 10902612]

38. IBRAGIMOV, Bulat, PRINCE, Jerry L., MURANO, Emi Z., WOO, Jonghye, STONE, Maureen, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Segmentation of tongue muscles from super-resolution magnetic resonance images. Medical image analysis. Feb. 2015, vol. 20, no. 1, str. 198-207, ilustr. ISSN 1361-8415. http://dx.doi.org/10.1016/j.media.2014.11.006, DOI: 10.1016/j.media.2014.11.006. [COBISS.SI-ID 10873940]

39. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Optimal reinforcement of training datasets in semi-supervised landmark-based segmentation. V: OURSELIN, Sébastien (ur.), STYNER, Martin Andreas (ur.). Medical Imaging 2015. Image Processing. Medical Imaging 2015, Image Processing, Orlando, Florida, United States, 21-26 February 2015. [Bellingham: SPIE], 2015. Str. 1-6, ilustr. Proceedings of SPIE, vol. 9413. ISBN 978-1-6284-1503-2. ISSN 0277-786X. http://spie.org/Publications/Proceedings/Paper/10.1117/12.2082321?origin_id=x4325&start_volume_number=9400, DOI: 10.1117/12.2082321. [COBISS.SI-ID 11018324]

40. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Comparison of manual and computerized measurements of sagittal vertebral inclination in MR images. V: YAO, Jianhua (ur.), KLINDER, Tobias (ur.), LI, Shuo (ur.). Computational methods and clinical applications for spine imaging : proceedings of the workshop held at the 16th International Conference on Medical Image Computing and Computer Assisted Intervention, September 22-26, 2013, Nagoya, Japan. Cham [etc.]: Springer, cop. 2014. Str. 111-121, ilustr. Lecture notes in computational vision and biomechanics, vol. 17. ISBN 978-3-319-07268-5, ISBN 3-319-07268-4, ISBN 978-3-319-07269-2. ISSN 2212-9391. http://link.springer.com/chapter/10.1007/978-3-319-07269-2_10. [COBISS.SI-ID 10735700]

41. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Segmentation of vertebrae from 3D spine images by applying concepts from transportation and game theories. V: YAO, Jianhua (ur.), KLINDER, Tobias (ur.), LI, Shuo (ur.). Computational methods and clinical applications for spine imaging : proceedings of the workshop held at the 16th International Conference on Medical Image Computing and Computer Assisted Intervention, September 22-26, 2013, Nagoya, Japan. Cham [etc.]: Springer, cop. 2014. Str. 3-14, ilustr. Lecture notes in computational vision and biomechanics, vol. 17. ISBN 978-3-319-07268-5, ISBN 3-319-07268-4, ISBN 978-3-319-07269-2. ISSN 2212-9391. http://link.springer.com/chapter/10.1007/978-3-319-07269-2_1. [COBISS.SI-ID 10735956]

42. KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Parametric modeling of the intervertebral disc space in 3D : application to CT images of the lumbar spine. Computerized Medical Imaging and Graphics. [Print ed.]. Oct. 2014, vol. 38, no. 7, str. 596-605, ilustr. ISSN 0895-6111. http://dx.doi.org/10.1016/j.compmedimag.2014.04.008, DOI: 10.1016/j.compmedimag.2014.04.008. [COBISS.SI-ID 10572116]

43. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Investigation of the reproducibility and reliability of sagittal vertebral inclination measurements from MR images of the spine. Computerized Medical Imaging and Graphics. [Print ed.]. Oct. 2014, vol. 38, no. 7, str. 620-627, ilustr. ISSN 0895-6111. http://dx.doi.org/10.1016/j.compmedimag.2014.04.005, DOI: 10.1016/j.compmedimag.2014.04.005. [COBISS.SI-ID 10571348]

44. SCHLÖSSER, Tom P. C., JANSSEN, Michiel M. A., VRTOVEC, Tomaž, PERNUŠ, Franjo, ÖNER, F. Cumhur, VIERGEVER, Max A., VINCKEN, Koen L., CASTELEIN, René M. Evolution of the ischio-iliac lordosis during natural growth and its relation with the pelvic incidence. European spine journal. Jul. 2014, vol. 23, no. 7, str. 1433-1441, ilustr. ISSN 0940-6719. https://link.springer.com/article/10.1007%2Fs00586-014-3358-z, DOI: 10.1007/s00586-014-3358-z. [COBISS.SI-ID 10578516]

45. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Shape representation for efficient landmark-based segmentation in 3-D. IEEE transactions on medical imaging. Apr. 2014, vol. 33, no. 4, str. 861-874, ilustr. ISSN 0278-0062. http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6698381, DOI: 10.1109/TMI.2013.2296976. [COBISS.SI-ID 10360660]

46. KOREZ, Robert, ŠTERN, Darko, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Determination of the intervertebral disc space from CT images of the lumbar spine. V: OURSELIN, Sébastien (ur.), STYNER, Martin Andreas (ur.). Medical imaging 2014. Image processing. Medical Imaging 2014, San Diego, USA, 15-20 Feb. 2014. [Bellingham: Society of Photo-Optical Instrumentation Engineers], 2014. Str. 1-6, ilustr. Proceedings of SPIE, vol. 9034. ISBN 978-0-8194-9827-4. ISSN 0277-786X. http://spie.org/Publications/Proceedings/Paper/10.1117/12.2043734, DOI: 10.1117/12.2043734. [COBISS.SI-ID 10573140]

47. VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Manual and computerized measurement of coronal vertebral inclination on MRI images : a pilot study. Clinical Radiology. 2013, vol. 68, no. 8, str. 807-814, ilustr. ISSN 0009-9260. DOI: 10.1016/j.crad.2013.03.008. [COBISS.SI-ID 9789012]

48. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Statistical shape representation with landmark clustering by solving the assignment problem. V: OURSELIN, Sébastien (ur.), HAYNOR, David R. (ur.). Medical imaging 2013. Image processing. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2013. Str. 1-6, ilustr. Proceedings of SPIE, vol. 8669. ISBN 978-0-8194-9443-6. ISSN 0277-786X. http://spie.org/x648.html?product_id=2006176, DOI: 10.1117/12.2006176. [COBISS.SI-ID 9730644]

49. ŠTERN, Darko, NJAGULJ, Vesna, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Quantitative vertebral morphometry in 3D. V: OURSELIN, Sébastien (ur.), HAYNOR, David R. (ur.). Medical imaging 2013. Image processing. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2013. Str. 1-11, ilustr. Proceedings of SPIE, vol. 8669. ISBN 978-0-8194-9443-6. ISSN 0277-786X. http://spie.org/x648.html?product_id=2003646, DOI: 10.1117/12.2003646. [COBISS.SI-ID 9730900]

50. ŠTERN, Darko, NJAGULJ, Vesna, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Quantitative vertebral morphometry based on parametric modeling of vertebral bodies in 3D. Osteoporosis international. Apr. 2013, vol. 24, no. 4, str. 1357-1368, ilustr. ISSN 0937-941X. http://www.springerlink.com/content/46v6577008r13656/fulltext.pdf, DOI: 10.1007/s00198-012-2089-4. [COBISS.SI-ID 9313876]

51. VRTOVEC, Tomaž, JANSSEN, Michiel M. A., LIKAR, Boštjan, CASTELEIN, René M., VIERGEVER, Max A., PERNUŠ, Franjo. Evaluation of pelvic morphology in the sagittal plane. The spine journal. Nov. 2013, vol. 13, no. 11, str. 1500-1509, ilustr. ISSN 1529-9430. DOI: 10.1016/j.spinee.2013.06.034. [COBISS.SI-ID 10177876]

52. JANSSEN, Michiel M. A., VINCKEN, Koen L., RAAK, Sjoerd M. van, VRTOVEC, Tomaž, KEMP, Bastiaan, VIERGEVER, Max A., BARTELS, Lambertus W., CASTELEIN, René M. Sagittal spinal profile and spinopelvic balance in parents of scoliotic children. The spine journal. 2013, vol. 13, no. 12, str. 1789-1800, ilustr. ISSN 1529-9430. http://www.sciencedirect.com/science/article/pii/S1529943013005391, DOI: 10.1016/j.spinee.2013.05.030. [COBISS.SI-ID 9942868]

53. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. A game-theoretic framework for landmark-based image segmentation. IEEE transactions on medical imaging. Sep. 2012, vol. 31, no. 9, str. 1761-1776, ilustr. ISSN 0278-0062. DOI: 10.1109/TMI.2012.2202915. [COBISS.SI-ID 9231956]

54. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Automated measurement of anterior and posterior acetabular sector angles. V: VAN GINNEKEN, Bram (ur.), NOVAK, Carol L. (ur.). Medical imaging 2012. Computer-aided diagnosis : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2012. Str. 1-7, ilustr. Proceedings of SPIE, vol. 8315. ISBN 978-0-8194-8964-7. ISSN 0277-786X. http://spie.org/x648.html?product_id=910873, DOI: 10.1117/12.910873. [COBISS.SI-ID 8986708]

55. ŠTERN, Darko, BÜRMEN, Miran, NJAGULJ, Vesna, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Automatic measurement of vertebral body deformations in CT images based on a 3D parametric model. V: VAN GINNEKEN, Bram (ur.), NOVAK, Carol L. (ur.). Medical imaging 2012. Computer-aided diagnosis : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2012. Str. 1-11, ilustr. Proceedings of SPIE, vol. 8315. ISBN 978-0-8194-8964-7. ISSN 0277-786X. http://spie.org/x648.html?product_id=911107, DOI: 10.1117/12.911107. [COBISS.SI-ID 8987220]

56. VRTOVEC, Tomaž, JANSSEN, Michiel M. A., PERNUŠ, Franjo, CASTELEIN, R. M., VIERGEVER, M. A. Computerized analysis of pelvic incidence from 3D images. V: HAYNOR, David R. (ur.), OURSELIN, Sébastien (ur.). Medical imaging 2012. Image processing : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2012. Str. 1-8, ilustr. Proceedings of SPIE, vol. 8314. ISBN 978-0-8194-8963-0. ISSN 0277-786X. http://spie.org/x648.html?product_id=910912, DOI: 10.1117/12.910912. [COBISS.SI-ID 8986196]

57. VRTOVEC, Tomaž, JANSSEN, Michiel M. A., PERNUŠ, Franjo, CASTELEIN, René M., VIERGEVER, Max A. Analysis of pelvic incidence from 3-dimensional images of a normal population. Spine. 2012, vol. 37, no. 8, str. 479-485, ilustr. ISSN 0362-2436. https://journals.lww.com/spinejournal/Abstract/2012/04150/Analysis_of_Pelvic_Incidence_From_3_Dimensional.17.aspx, DOI: 10.1097/BRS.0b013e31823770af. [COBISS.SI-ID 8895060]

58. USENIK, Peter, VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Automated tracking and analysis of phospholipid vesicle contours in phase contrast microscopy images. Medical & biological engineering & computing : journal of the International Federation for Medical & Biological Engineering. [Print ed.]. 2011, vol. 49, no. 8, str. 957-966, ilustr. ISSN 0140-0118. http://ehis.ebscohost.com/eds/pdfviewer/pdfviewer?vid=3&sid=3deac3db-f7fb-4d22-a3c0-4c2e92237341%40sessionmgr114&hid=101, DOI: 10.1007/s11517-011-0789-0. [COBISS.SI-ID 8453460]

59. USENIK, Peter, BÜRMEN, Miran, VRTOVEC, Tomaž, FIDLER, Aleš, PERNUŠ, Franjo, LIKAR, Boštjan. Automated classification and visualization of healthy and pathological dental tissues based on near-infrared hyper-spectral imaging. V: SUMMERS, Ronald Marc (ur.), VAN GINNEKEN, Bram (ur.). Medical imaging 2011 : computer-aided diagnosis : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2011. Str. 1-8, ilustr. Proceedings of SPIE, vol. 7963. ISBN 978-0-8194-8505-2. ISSN 0277-786X. http://spie.org/x648.html?product_id=878264. [COBISS.SI-ID 8253524]

60. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Determination of vertebral pose in 3D by minimization of vertebral asymmetry. V: DAWANT, Benoit M. (ur.), HAYNOR, David R. (ur.). Medical imaging 2011. Image processing : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2011. Str. 1-7, ilustr. Proceedings of SPIE, vol. 7962. ISBN 978-0-8194-8504-5. ISSN 0277-786X. http://spie.org/x648.html?product_id=877762. [COBISS.SI-ID 8252500]

61. ŠTERN, Darko, VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Segmentation of vertebral bodies in CT and MR images based on 3D deterministic models. V: DAWANT, Benoit M. (ur.), HAYNOR, David R. (ur.). Medical imaging 2011. Image processing : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2011. Str. 1-12, ilustr. Proceedings of SPIE, vol. 7962. ISBN 978-0-8194-8504-5. ISSN 0277-786X. http://spie.org/x648.html?product_id=877365. [COBISS.SI-ID 8252244]

62. ŠTERN, Darko, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Parametric modelling and segmentation of vertebral bodies in 3D CT and MR spine images. Physics in Medicine & Biology. 2011, vol. 56, no. 23, str. 7505-7522, ilustr. ISSN 0031-9155. [COBISS.SI-ID 8805716]

63. VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Manual and computerized measurement of sagittal vertebral inclination in computed tomography images. Spine. Jun. 2011, vol. 36, no. 13, str. e875-e881, ilustr. ISSN 0362-2436. [COBISS.SI-ID 8373332]

64. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Determination of axial vertebral rotation in MR images : comparison of four manual and a computerized method. European spine journal. May 2010, vol. 19, no. 5, str. 774-781, ilustr. ISSN 0940-6719. http://www.springerlink.com/content/l471551vjj5m4w44/fulltext.pdf. [COBISS.SI-ID 7586132]

65. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Evaluation of sagittal vertebral rotation in CT images by manual and automated methods. V: From nano to macro. 2010 IEEE International Symposium on Biomedical Imaging, 14-17 April 2010, Rotterdam, The Netherlands. [Piscataway]: IEEE, cop. 2010. Str. 412-415, ilustr. Proceedings (International Symposium on Biomedical Imaging. CD-ROM). ISBN 978-1-4244-4126-6. ISSN 1945-7936. [COBISS.SI-ID 7691348]

66. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Evaluation of manual and computerized methods for the determination of axial vertebral rotation. V: DAWANT, Benoit M. (ur.), HAYNOR, David R. (ur.). Medical imaging 2010. Image processing : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2010. Str. 1-11, ilustr. Proceedings of SPIE, vol. 7623. ISBN 978-0-8194-8024-8. ISSN 0277-786X. http://spie.org/x648.html?product_id=843528. [COBISS.SI-ID 7587156]

67. ŠTERN, Darko, VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Automated determination of the centers of vertebral bodies and intervertebral discs in CT and MR lumbar spine images. V: DAWANT, Benoit M. (ur.), HAYNOR, David R. (ur.). Medical imaging 2010. Image processing : proceedings volume. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2010. Str. 1-12, ilustr. Proceedings of SPIE, vol. 7623. ISBN 978-0-8194-8024-8. ISSN 0277-786X. http://spie.org/x648.html?product_id=844567. [COBISS.SI-ID 7586644]

68. ŠTERN, Darko, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Segmentation of vertebral bodies in MR images based on geometrical models in 3D. V: LIAO, Hongen (ur.). Medical imaging and augmented reality : proceedings. Berlin; Heidelberg: Springer, cop. 2010. Str. 419-428, ilustr. Lecture notes in computer science, Lecture notes in artifical intelligence, 6326. ISBN 3-642-15698-3, ISBN 978-3-642-15698-4. ISSN 0302-9743. http://www.springerlink.com/content/1n6313741615wj42/. [COBISS.SI-ID 7958612]

69. ŠTERN, Darko, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Automated detection of spinal centrelines, vertebral bodies and intervertebral discs in CT and MR images of lumbar spine. Physics in Medicine & Biology. 2010, vol. 55, no. 1, str. 247-264, ilustr. ISSN 0031-9155. [COBISS.SI-ID 7480916]

70. VRTOVEC, Tomaž, VENGUST, Rok, LIKAR, Boštjan, PERNUŠ, Franjo. Analysis of four manual and a computerized method for measuring axial vertebral rotation in computed tomography images. Spine. 2010, vol. 35, no. 12, str. e535-e541, ilustr. ISSN 0362-2436. [COBISS.SI-ID 7707220]

71. ŠTERN, Darko, VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Automated determination of spinal centerline in CT and MR images. V: PLUIM, Josien P. W. (ur.), DAWANT, Benoit M. (ur.). Medical imaging 2009. Image processing. [Bellingham: Society of Photo-Optical Instrumentation Engineers]: = SPIE, 2009. Str. 1-11, ilustr. Proceedings of SPIE, vol. 7259. ISSN 0277-786X. http://dx.doi.org/10.1117/12.811150. [COBISS.SI-ID 7089236]

72. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. A symmetry-based method for the determination of vertebral rotation in 3D. V: METAXAS, Dimitris N. (ur.). Medical image computing and computer-assisted intervention - MICCAI 2008 : 11th International Conference, New York, NY, USA, September 6-10, 2008 : proceedings. Berlin; Heidelberg; New York: Springer, cop. 2008. Part 1, str. 942-950, ilustr. Lecture notes in computer science, 4241, 4242. ISBN 3-540-85987-X, ISBN 3-540-85989-6, ISBN 978-3-540-85987-1, ISBN 978-3-540-85989-5. ISSN 0302-9743. [COBISS.SI-ID 6632276]

73. VRTOVEC, Tomaž. Modality-independent determination of vertebral position and rotation in 3D. V: DOHI, Takeyoshi (ur.), SAKUMA, Ichiro (ur.), LIAO, Hongen (ur.). Medical imaging and augmented reality : proceedings. Berlin; Heidelberg; New York: Springer, cop. 2008. Str. 89-97, ilustr. Lecture notes in computer science, 5128. ISBN 3-540-79981-8, ISBN 978-3-540-79981-8. ISSN 0302-9743. [COBISS.SI-ID 6609236]

74. VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Quantitative analysis of spinal curvature in 3D : application to CT images of normal spine. Physics in Medicine & Biology. Apr. 2008, vol. 53, no. 7, str. 1895-1908, ilustr. ISSN 0031-9155. [COBISS.SI-ID 6347604]

75. VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Determination of 3D location and rotation of lumbar vertebrae in CT images by symmetry-based auto-registration. V: PLUIM, Josien P. W. (ur.), REINHARDT, Joseph M. (ur.). Medical imaging 2007. Image processing : 18-20 February 2007, San Diego, California, USA. Bellingham: International Society for Optical Engineering: = SPIE, cop. 2007. Part 2, str. [1-12], ilustr. Progress in biomedical optics and imaging, vol. 8, no. 31, Proceedings of SPIE, vol. 6512. ISBN 978-0-8194-6630-3. ISSN 1605-7422, ISSN 0277-786X. [COBISS.SI-ID 5876564]

76. VRTOVEC, Tomaž, OURSELIN, Sébastien, GOMES, Lavier, LIKAR, Boštjan, PERNUŠ, Franjo. Automated generation of curved planar reformations from MR images of the spine. Physics in Medicine & Biology. 2007, vol. 52, no. 10, str. 2865-2878, ilustr. ISSN 0031-9155. [COBISS.SI-ID 5881940]

77. VRTOVEC, Tomaž, OURSELIN, Sébastien, GOMES, Lavier, LIKAR, Boštjan, PERNUŠ, Franjo. Generation of curved planar reformations from magnetic resonance images of the spine. V: Medical image computing and computer-assisted intervention - MICCAI 2006 : 9th International Conference, Copenhagen, Denmark, October 1-6, 2006, proceedings. Berlin; Heidelberg: Springer, cop. 2006. Part 2, str. [135]-143, ilustr. Lecture notes in computer science, 4190, 4191. ISBN 3-540-44707-5, ISBN 3-540-44727-X, ISBN 978-3-540-44707-8, ISBN 978-3-540-44727-6. ISSN 0302-9743. [COBISS.SI-ID 5518164]

78. VRTOVEC, Tomaž. Curved planar reformation of CT spine images. Elektrotehniški vestnik. [Slovenska tiskana izd.]. 2005, letn. 72, št. 5, str. 285-290, ilustr. ISSN 0013-5852. [COBISS.SI-ID 5128276]

79. VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Automated curved planar reformation of 3D spine images. Physics in Medicine & Biology. Oct. 2005, vol. 50, no. 19, str. 4527-4540, ilustr. ISSN 0031-9155. [COBISS.SI-ID 4992852]

80. VRTOVEC, Tomaž, TOMAŽEVIČ, Dejan, LIKAR, Boštjan, TRAVNIK, Ludvik, PERNUŠ, Franjo. Automated construction of 3D statistical shape models. Image analysis & stereology : official journal of the International Society for Stereology. [Tiskana izd.]. 2004, vol. 23, no. 2, str. 111-120. ISSN 1580-3139. Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 4244308]

81. VRTOVEC, Tomaž, IBRAGIMOV, Bulat. Spinopelvic measurements of sagittal balance with deep learning : systematic review and critical evaluation. European spine journal. Aug. 2022, vol. 31, iss. 8, str. 2031-2045, ilustr. ISSN 0940-6719. https://link.springer.com/article/10.1007/s00586-022-07155-5, DOI: 10.1007/s00586-022-07155-5. [COBISS.SI-ID 100711939]

82. VRTOVEC, Tomaž, MOČNIK, Domen, STROJAN, Primož, PERNUŠ, Franjo, IBRAGIMOV, Bulat. Auto-segmentation of organs at risk for head and neck radiotherapy planning : from atlas-based to deep learning methods. Medical physics. [Print ed.]. Sep. 2020, vol. 47, no. 9, str. e929-e950, ilustr. ISSN 0094-2405. https://aapm.onlinelibrary.wiley.com/doi/abs/10.1002/mp.14320, DOI: 10.1002/mp.14320. [COBISS.SI-ID 18653955]

83. VRTOVEC, Tomaž, JANSSEN, Michiel M. A., LIKAR, Boštjan, CASTELEIN, R. M., VIERGEVER, M. A., PERNUŠ, Franjo. A review of methods for evaluating the quantitative parameters of sagittal pelvic alignment. The spine journal. May 2012, vol. 12, no. 5, str. 433-446, ilustr. ISSN 1529-9430. http://dx.doi.org/10.1016/j.spinee.2012.02.013, DOI: 10.1016/j.spinee.2012.02.013. [COBISS.SI-ID 9064788]

84. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. A review of methods for quantitative evaluation of spinal curvature. European spine journal. May 2009, vol. 18, no. 5, str. 593-607, ilustr. ISSN 0940-6719. http://www.springerlink.com/content/0030501021588423/fulltext.pdf. [COBISS.SI-ID 6949204]

85. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. A review of methods for quantitative evaluation of axial vertebral rotation. European spine journal. Aug. 2009, vol. 18, no. 8, str. 1079-1090, ilustr. ISSN 0940-6719. http://www.springerlink.com/content/l88638nh8u618218/fulltext.pdf. [COBISS.SI-ID 6949460]

86. IŠGUM, Ivana, LANDMAN, Bennett A., VRTOVEC, Tomaž. Special section guest editorial : advances in high-dimensional medical image processing. Journal of medical imaging. Oct. 2022, iss. 5, 052401, str. 1-2. ISSN 2329-4310. DOI: 10.1117/1.JMI.9.5.052401. [COBISS.SI-ID 129152771]

87. SCHLÖSSER, Tom P. C., JANSSEN, Michiel M. A., VRTOVEC, Tomaž, CASTELEIN, René M. Letter to the editor concerning "Pelvic incidence: an anatomic investigation of 880 cadaveric specimens" by Weinberg DS, Morris WZ, Gebhart JJ, Liu RW: Eur Spine J (2015), doi: 10.1007/s00586-015-4317-z. European spine journal. Sep. 2016, vol. 25, no. 9, str. 3004-3005. ISSN 0940-6719. http://link.springer.com/article/10.1007/s00586-015-4363-6, DOI: 10.1007/s00586-015-4363-6. [COBISS.SI-ID 11247700]

88. VRTOVEC, Tomaž, JANSSEN, M. M. A., PERNUŠ, Franjo, CASTELEIN, René M., VIERGEVER, Max A. Pelvic incidence : analysis in three dimensions. Journal of bone and joint surgery. British volume. 2012, vol. 94-b, suppl. xliv, str. 107. ISSN 0301-620X. [COBISS.SI-ID 9623636]

89. PODOBNIK, Gašper, VRTOVEC, Tomaž. Metrics revolutions : groundbreaking insights into the implementation of metrics for biomedical image segmentation. ArXiv.org. 3 Oct. 2024, 25 str., ilustr. ISSN 2331-8422. https://arxiv.org/abs/2410.02630, DOI: 10.48550/arXiv.2410.02630. [COBISS.SI-ID 214626563]

90. PODOBNIK, Gašper, VRTOVEC, Tomaž. Centerline dice metric implementation is not streamlined. V: COLLIOT, Olivier (ur.), MITRA, Jhimli (ur.). Medical imaging 2025 : Image Processing : 17-20 February 2025 San Diego, California, United States. Bellingham: SPIE, cop. 2025. 7 str., ilustr. Progress in biomedical optics and imaging (Online), vol. 26, no. 51, Proceedings of SPIE, Vol. 13406. ISBN 978-1-51-068590-1. ISSN 2410-9045, ISSN 1996-756X. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/13406/3047456/Centerline-dice-metric-implementation-is-not-streamlined/10.1117/12.3047456.short, DOI: 10.1117/12.3047456. [COBISS.SI-ID 233985539]

91. ŠTER, Rok Marko, PODOBNIK, Gašper, VRTOVEC, Tomaž. Diffusion-based MR-to-CT translation of head and neck images. V: COLLIOT, Olivier (ur.), MITRA, Jhimli (ur.). Medical imaging 2025 : Image Processing : 17-20 February 2025 San Diego, California, United States. Bellingham: SPIE, cop. 2025. 6 str., ilustr. Progress in biomedical optics and imaging (Online), vol. 26, no. 51, Proceedings of SPIE, Vol. 13406. ISBN 978-1-51-068590-1. ISSN 2410-9045, ISSN 1996-756X. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/13406/3047458/Diffusion-based-MR-to-CT-translation-of-head-and-neck/10.1117/12.3047458.short, DOI: 10.1117/12.3047458. [COBISS.SI-ID 233999107]

92. ŠKRLJ, Luka, VRTOVEC, Tomaž. Introducing cosine similarity into the loss function : application to 3D vertebra segmentation. V: COLLIOT, Olivier (ur.), MITRA, Jhimli (ur.). Medical imaging 2025 : Image Processing : 17-20 February 2025 San Diego, California, United States. Bellingham: SPIE, cop. 2025. 7 str., ilustr. Progress in biomedical optics and imaging (Online), vol. 26, no. 51, Proceedings of SPIE, Vol. 13406. ISBN 978-1-51-068590-1. ISSN 2410-9045, ISSN 1996-756X. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/13406/3047157/Introducing-cosine-similarity-into-the-loss-function--application-to/10.1117/12.3047157.short, DOI: 10.1117/12.3047157. [COBISS.SI-ID 233996547]

93. PODOBNIK, Gašper, OCEPEK, Domen, ŠKRLJ, Luka, VRTOVEC, Tomaž. Implicitly explicit : segmenting vertebrae with deep implicit statistical shape models. V: WACHINGER, Christian (ur.). Shape in Medical Imaging : International Workshop, ShapeMI 2024 : held in conjunction with MICCAI 2024 : Marrakesh, Morocco, October 6, 2024 : proceedings. Cham: Springer, cop. 2025. Str. 59-69, ilustr. Lecture notes in computer science (Internet), vol. 15275. ISBN 978-3-031-75291-9. ISSN 1611-3349. https://link.springer.com/chapter/10.1007/978-3-031-75291-9_5, DOI: 10.1007/978-3-031-75291-9_5. [COBISS.SI-ID 214268163]

94. VRTOVEC, Tomaž, ŠKRLJ, Luka. Zgodnje odkrivanje tveganja nenalezljivih bolezni pri bolnikih z rakom dojk na podlagi umetne inteligence (projekt ARTILLERY). V: ŽGAJNAR, Janez (ur.), DURATOVIĆ KONJEVIĆ, Amela (ur.). 35. onkološki vikend : umetna inteligenca v onkologiji in spremljanje bolnikov z rakom po zaključenem zdravljenju : zbornik : Portorož, GH Bernardin, 10. in 11. maj 2024. Ljubljana: Kancerološko združenje Slovenskega zdravniškega društva: Onkološki inštitut, 2024. Str. 30-37, ilustr. ISBN 978-961-7029-82-6. DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 195414019]

95. PODOBNIK, Gašper, VRTOVEC, Tomaž. HDilemma : are open-source Hausdorff distance implementations equivalent?. V: LINGURARU, Marius George (ur.). Medical Image Computing and Computer Assisted Intervention – MICCAI 2024 : 27th International Conference : Marrakesh, Morocco, October 6–10, 2024 : proceedings. Pt. IX. Cham: Springer, cop. 2024. Str. 308-317, ilustr. Lecture notes in computer science (Internet), vol. 15009. ISBN 978-3-031-72114-4. ISSN 1611-3349. https://link.springer.com/chapter/10.1007/978-3-031-72114-4_30, DOI: 10.1007/978-3-031-72114-4_30. [COBISS.SI-ID 214283523]

96. OCEPEK, Domen, PODOBNIK, Gašper, IBRAGIMOV, Bulat, VRTOVEC, Tomaž. Deep implicit statistical shape models for 3D lumbar vertebrae image delineation. V: COLLIOT, Olivier (ur.), MITRA, Jhimli (ur.). Medical imaging 2024 : Image Processing : 18-23 February 2024 San Diego, California, United States. Bellingham: SPIE, cop. 2024. Str. 1-7, ilustr. Proceedings of SPIE, the International Society for Optical Engineering, vol. 12926. ISSN 1996-756X. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/12926/1292638/Deep-implicit-statistical-shape-models-for-3D-lumbar-vertebrae-image/10.1117/12.3007664.short, DOI: 10.1117/12.3007664. [COBISS.SI-ID 191585795]

97. ŠKRLJ, Luka, JELENC, Matija, VRTOVEC, Tomaž. Deep learning-based landmark localization in 3D CT images of the heart : method and dataset comparison. V: COLLIOT, Olivier (ur.), MITRA, Jhimli (ur.). Medical imaging 2024 : Image Processing : 18-23 February 2024 San Diego, California, United States. Bellingham: SPIE, cop. 2024. Str. 1-7, ilustr. Proceedings of SPIE, the International Society for Optical Engineering, vol. 12926. ISSN 1996-756X. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/12926/3006326/Deep-learning-based-landmark-localization-in-3D-CT-images-of/10.1117/12.3006326.short, DOI: 10.1117/12.3006326. [COBISS.SI-ID 192626179]

98. IBRAGIMOV, Kamil, PODOBNIK, Gašper, TROJNER, Teodor, REČNIK, Gregor, VRTOVEC, Tomaž. Mid-sagittal cross-section identification for vertebra landmarking in MR spine images. V: COLLIOT, Olivier (ur.), MITRA, Jhimli (ur.). Medical imaging 2024 : Image Processing : 18-23 February 2024 San Diego, California, United States. Bellingham: SPIE, cop. 2024. Str. 1-6, ilustr. Proceedings of SPIE, the International Society for Optical Engineering, vol. 12926. ISSN 1996-756X. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/12926/1292637/Mid-sagittal-cross-section-identification-for-vertebra-landmarking-in-MR/10.1117/12.3007593.short, DOI: 10.1117/12.3007593. [COBISS.SI-ID 191582979]

99. ŠKRLJ, Luka, JELENC, Matija, VRTOVEC, Tomaž. Detection of aortic cusp landmarks in computed tomography images with deep learning. V: BERNARD, Olivier (ur.), et al. Functional imaging and modeling of the heart : 12th International Conference, FIHM 2023 : Lyon, France, June 19-22, 2023 : proceedings. Cham: Springer, cop. 2023. Str. 301-309, ilustr. Lecture notes in computer science (Internet), 13958. ISBN 978-3-031-35302-4. ISSN 1611-3349. https://link.springer.com/chapter/10.1007/978-3-031-35302-4_31, DOI: 10.1007/978-3-031-35302-4_31. [COBISS.SI-ID 157219075]

100. PODOBNIK, Gašper, STROJAN, Primož, PETERLIN, Primož, IBRAGIMOV, Bulat, VRTOVEC, Tomaž. Multimodal CT and MR segmentation of head and neck organs-at-risk. V: GREENSPAN, Hayit (ur.). Medical Image Computing and Computer Assisted Intervention - MICCAI 2023 : 26th International Conference : Vancouver, BC, Canada, October 8–12, 2023 : proceedings. Pt. IV. Cham: Springer, cop. 2023. Str. 745-755, ilustr. Lecture notes in computer science (Internet), 14223. ISBN 978-3-031-43901-8. ISSN 1611-3349. https://link.springer.com/chapter/10.1007/978-3-031-43901-8_71, DOI: 10.1007/978-3-031-43901-8_71. [COBISS.SI-ID 171494147]

101. PODOBNIK, Gašper, IBRAGIMOV, Bulat, STROJAN, Primož, PETERLIN, Primož, VRTOVEC, Tomaž. Segmentation of organs-at-risk from CT and MR images of the head and neck : baseline results. V: IEEE ISBI 2022 proceedings : 2022 IEEE International Symposium on Biomedical Imaging : March 28 - 31, 2022 : Kolkata, India. Piscataway: IEEE, cop. 2022. Str. 1-4, ilustr. ISBN 978-1-6654-2923-8. https://ieeexplore.ieee.org/document/9761433. [COBISS.SI-ID 106601987]

102. PODOBNIK, Gašper, STROJAN, Primož, PETERLIN, Primož, IBRAGIMOV, Bulat, VRTOVEC, Tomaž. Parotid gland segmentation with nnU-Net : deployment scenario and inter-observer variability analysis. V: COLLIOT, Olivier (ur.), IŠGUM, Ivana (ur.). Medical Imaging 2022 : image processing : 20 February - 28 March 2022, San Diego, California, United States. Pt. 1. Bellingham: SPIE, cop. 2022. Str. 1-8, ilustr. Proceedings of SPIE, vol. 12032, Progress in biomedical optics and imaging, vol. 23, no. 48. ISBN 978-1-51064-940-8. ISSN 0277-786X, ISSN 1605-7422. DOI: 10.1117/12.2609406. [COBISS.SI-ID 106571523]

103. BEKKOUCH, Imad Eddine Ibrahim, AIDINOVICH, Tamerlan, VRTOVEC, Tomaž, KULEEV, Ramil, IBRAGIMOV, Bulat. Multi-agent shape models for hip landmark detection in MR scans. V: IŠGUM, Ivana (ur.), LANDMAN, Bennett A. (ur.). Medical Imaging 2021 : image processing : 15-20 February 2021, online only, California, United States. [Bellingham: SPIE], 2021. Str. 1-10, ilustr. Proceedings of SPIE, vol. 11596. ISSN 0277-786X. https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11596/115960O/Multi-agent-shape-models-for-hip-landmark-detection-in-MR/10.1117/12.2580862.short, DOI: 10.1117/12.2580862. [COBISS.SI-ID 53542915]

104. KOREZ, Robert, PUTZIER, Michael, VRTOVEC, Tomaž. Automated measurement of pelvic incidence from X-ray images. V: VRTOVEC, Tomaž (ur.), et al. Computational methods and clinical applications in musculoskeletal imaging : revised selected papers. 6th International Workshop, MSKI 2018, held in conjunction with MICCAI 2018, Granada, Spain, September 16, 2018. Cham: Springer, cop. 2019. Str. 146-152, ilustr. Lecture notes in computer science, 11404. ISBN 978-3-030-11165-6. ISSN 0302-9743. https://link.springer.com/chapter/10.1007/978-3-030-11166-3_13, DOI: 10.1007/978-3-030-11166-3_13. [COBISS.SI-ID 12340820]

105. KNEZ, Dejan, NAHLE, Imad S., VRTOVEC, Tomaž, PARENT, Stefan, KADOURY, Samuel. Computer-assisted pedicle screw placement planning : towards clinical practice. V: 2018 IEEE International Symposium on Biomedical Imaging. 15th ISBI, April 4-7, 2018, Washington, D. C. Danvers: IEEE, cop. 2018. Str. 249-252, ilustr. ISBN 978-1-5386-3635-0. [COBISS.SI-ID 12005204]

106. PETKOVIĆ, Uroš, KOREZ, Robert, PARENT, Stefan, KADOURY, Samuel, VRTOVEC, Tomaž. 3D Cobb angle measurements from scoliotic mesh models with varying face-vertex density. V: GLOCKER, Ben (ur.), et al. Computational methods and clinical applications in musculoskeletal imaging : revised selected papers. 5th International Workshop, MSKI 2017, held in conjunction with MICCAI 2017, Quebec City, QC, Canada, September 10, 2017. Cham: Springer, cop. 2018. Str. 48-58, ilustr. Lecture notes in computer science, 10734. ISSN 0302-9743. https://link.springer.com/chapter/10.1007/978-3-319-74113-0_5#citeas, DOI: 10.1007/978-3-319-74113-0_5. [COBISS.SI-ID 11965524]

107. KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Segmentation of pathological spines in CT images using a two-way CNN and a collision-based model. V: GLOCKER, Ben (ur.), et al. Computational methods and clinical applications in musculoskeletal imaging : revised selected papers. 5th International Workshop, MSKI 2017, held in conjunction with MICCAI 2017, Quebec City, QC, Canada, September 10, 2017. Cham: Springer, cop. 2018. Str. 95-107, ilustr. Lecture notes in computer science, 10734. ISSN 0302-9743. https://link.springer.com/chapter/10.1007/978-3-319-74113-0_9#citeas, DOI: 10.1007/978-3-319-74113-0_9. [COBISS.SI-ID 11965268]

108. KOREZ, Robert, PUTZIER, Michael, VRTOVEC, Tomaž. Automated measurement of pelvic incidence from X-Ray images. V: VRTOVEC, Tomaž (ur.), et al. MSKI 2018 : proceedings. 6th MICCAI Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging, Sep. 16, 2018, Granada, Spain. [S. l.: s. n.], 2018. Str. 141-147, ilustr. https://drive.google.com/file/d/1_sS4MyI7ZyqZs__TK-Lrfs_tgPjMYmIh/view. [COBISS.SI-ID 12201556]

109. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Intervertebral disc segmentation in MR images with 3D convolutional networks. V: STYNER, Martin Andreas (ur.), ANGELINI, Elsa D. (ur.). Medical Imaging 2017. Image Processing. Medical Imaging 2017, Image Processing, Orlando, Florida, United States, 11-16 February 2017. [Bellingham: SPIE], 2017. Str. 1-10, ilustr. Proceedings of SPIE, vol. 10133. ISBN 978-1-5106-0711-8. ISSN 0277-786X. https://spie.org/Publications/Proceedings/Paper/10.1117/12.2254069, DOI: 10.1117/12.2254069. [COBISS.SI-ID 11699284]

110. PETKOVIĆ, Uroš, KOREZ, Robert, PARENT, Stefan, KADOURY, Samuel, VRTOVEC, Tomaž. 3D Cobb angle measurements from scoliotic mesh models with varying face-vertex density. V: GLOCKER, Ben (ur.), et al. MSKI 2017 : proceedings. 5th MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging, MICCAI-MSKI2017, Sep. 10, 2017, Quebec City, Canada. [S. l.]: Wordpress.com, 2017. Str. 46-55, ilustr. https://mski2017.files.wordpress.com/2017/09/miccai-mski2017.pdf. [COBISS.SI-ID 11809876]

111. KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Segmentation of pathological spines in CT images using a two-way CNN and a collision-based model. V: GLOCKER, Ben (ur.), et al. MSKI 2017 : proceedings. 5th MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging, MICCAI-MSKI2017, Sep. 10, 2017, Quebec City, Canada. [S. l.]: Wordpress.com, 2017. Str. 91-103, ilustr. https://mski2017.files.wordpress.com/2017/09/miccai-mski2017.pdf. [COBISS.SI-ID 11810132]

112. PETKOVIĆ, Uroš, KOREZ, Robert, VRTOVEC, Tomaž. Semi-automated measurement of the Cobb angle from 3D mesh models of the scoliotic spine. V: KOVAČIČ, Stanislav (ur.), et al. Proceedings of the 10th International Symposium on Image and Signal Processing and Analysis. ISPA 2017, September 18-20, Ljubljana, Slovenia. [S. l.]: IEEE Xplore; Zagreb: University of Zagreb, cop. 2017. Str. 137-140, ilustr. ISBN 978-1-5090-4011-7. http://ieeexplore.ieee.org/document/8073584/, DOI: 10.1109/ISPA.2017.8073584. [COBISS.SI-ID 11813972]

113. KNEZ, Dejan, MOHAR, Janez, CIRMAN, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Manual and computer-assisted pedicle screw placement plans : a quantitative comparison. V: YAO, Jianhua (ur.), et al. CSI 2016. 4th MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging, October 17, 2016, Athens, Greece. [S. l.: s. n.], 2016. Str. 78-88, ilustr. [COBISS.SI-ID 11578452]

114. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Accurate landmark-based segmentation by incorporating landmark misdetections. V: From nano to macro. 2016 IEEE International Symposium on Biomedical Imaging, 13-16 April 2016, Prague, Czech Republic. Piscataway: IEEE, cop. 2016. Str. 1072-1075, ilustr. ISBN 978-1-4799-2350-2. [COBISS.SI-ID 11364436]

115. KNEZ, Dejan, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Automated determination of pedicle morphometry in the thoracic spine. V: From nano to macro. 2016 IEEE International Symposium on Biomedical Imaging, 13-16 April 2016, Prague, Czech Republic. Piscataway: IEEE, cop. 2016. Str. 664-667, ilustr. ISBN 978-1-4799-2350-2. [COBISS.SI-ID 11351124]

116. KOREZ, Robert, AUBERT, Benjamin, CRESSON, Thierry, PARENT, Stefan, VRTOVEC, Tomaž, GUISE, Jacques de, KADOURY, Samuel. Sparse and multi-object pose+shape modeling of the three-dimensional scoliotic spine. V: From nano to macro. 2016 IEEE International Symposium on Biomedical Imaging, 13-16 April 2016, Prague, Czech Republic. Piscataway: IEEE, cop. 2016. Str. 225-228, ilustr. ISBN 978-1-4799-2350-2. [COBISS.SI-ID 11351380]

117. KNEZ, Dejan, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Automated pedicle screw size and trajectory planning by maximization of fastening strength. V: VRTOVEC, Tomaž (ur.), et al. CSI 2015 : proceedings. 3rd MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging, October 5, 2015, Munich, Germany. [S. l.: s. n.], 2015. Str. 13-23, ilustr. [COBISS.SI-ID 11182676]

118. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Deformable model-based segmentation of intervertebral discs from MR spine images by using the SSC descriptor. V: VRTOVEC, Tomaž (ur.), et al. CSI 2015 : proceedings. 3rd MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging, October 5, 2015, Munich, Germany. [S. l.: s. n.], 2015. Str. 111-118, ilustr. [COBISS.SI-ID 11182932]

119. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. An improved shape-constrained deformable model for segmentation of vertebrae from CT lumbar spine images. V: YAO, Jianhua (ur.), et al. Recent advances in computational methods and clinical applications for spine imaging. 2nd MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging, September 14, 2014, Boston. Cham [etc.]: Springer, cop. 2015. Str. 85-94, ilustr. Lecture notes in computational vision and biomechanics (Print), 20. ISBN 978-3-319-14147-3. ISSN 2212-9391. http://link.springer.com/chapter/10.1007/978-3-319-14148-0_8. [COBISS.SI-ID 10954580]

120. IBRAGIMOV, Bulat, KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Interpolation-Based Detection of Lumbar Vertebrae in CT Spine Images. V: YAO, Jianhua (ur.), et al. Recent advances in computational methods and clinical applications for spine imaging. 2nd MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging, September 14, 2014, Boston. Cham [etc.]: Springer, cop. 2015. Str. 73-84, ilustr. Lecture notes in computational vision and biomechanics (Print), 20. ISBN 978-3-319-14147-3. ISSN 2212-9391. http://link.springer.com/chapter/10.1007/978-3-319-14148-0_7. [COBISS.SI-ID 10954068]

121. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Interpolation-based shape-constrained deformable model approach for segmentation of vertebrae from CT spine images. V: YAO, Jianhua (ur.), et al. Recent advances in computational methods and clinical applications for spine imaging. 2nd MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging, September 14, 2014, Boston. Cham [etc.]: Springer, cop. 2015. Str. 235-240, ilustr. Lecture notes in computational vision and biomechanics (Print), 20. ISBN 978-3-319-14147-3. ISSN 2212-9391. http://link.springer.com/chapter/10.1007/978-3-319-14148-0_21. [COBISS.SI-ID 10954836]

122. IBRAGIMOV, Bulat, KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Interpolation-based detection of lumbar vertebrae in CT spine images. V: MICCAI 2014. MICCAI 2014, Boston, September 14-18, 2014. [S. l.; s. n.], 2014. S-w14-sci proceedings, str. 65-75, ilustr. [COBISS.SI-ID 10765908]

123. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. An improved shape-constrained deformable model for segmentation of vertebrae from CT lumbar spine images. V: MICCAI 2014. MICCAI 2014, Boston, September 14-18, 2014. [S. l.; s. n.], 2014. S-w14-sci proceedings, str. 76-85, ilustr. [COBISS.SI-ID 10766164]

124. KOREZ, Robert, IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Interpolation-based shape-constrained deformable model approach for segmentation of vertebrae from CT spine images. V: MICCAI 2014. MICCAI 2014, Boston, September 14-18, 2014. [S. l.; s. n.], 2014. S-w14-sci proceedings, str. 208-212, ilustr. [COBISS.SI-ID 10765652]

125. VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Comparison of manual and computerized measurements of sagittal vertebral inclination in MR images. V: YAO, Jianhua (ur.), KLINDER, Tobias (ur.), LI, Shuo (ur.). Proceeding of the Workshop on Computational Methods and Clinical Applications for Spine Imaging September 26th, 2013, Nagoya, Japan. [S. l.: s. n.], cop. 2013. Str. 100-110, ilustr. [COBISS.SI-ID 10562644]

126. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Segmentation of vertebrae from 3D spine images by applying concepts from transportation and game theories. V: YAO, Jianhua (ur.), KLINDER, Tobias (ur.), LI, Shuo (ur.). Proceeding of the Workshop on Computational Methods and Clinical Applications for Spine Imaging September 26th, 2013, Nagoya, Japan. [S. l.: s. n.], cop. 2013. Str. 1-12, ilustr. [COBISS.SI-ID 10562900]

127. IBRAGIMOV, Bulat, VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Segmentation of lung fields by game theory and dynamic programming. V: BEICHEL, Reinhard (ur.). The Fourth International Workshop on Pulmonary Image Analysis : Toronto, Canada, September 18, 2011. [S. l.: s. n.], cop. 2011. Str. 101-111, ilustr. ISBN 978-1-4662-0016-6. [COBISS.SI-ID 8670292]

128. USENIK, Peter, VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Automated tracking of vesicles in phase contrast microscopy images. V: ICPR 2010 : proceedings. 20th International Conference on Pattern Recognition, Istanbul, Turkey, 23-26 August 2010. Los Alamitos; Piscataway; Tokyo: IEEE Computer Society, cop. 2010. Str. 2520-2523, ilustr. International Conference on Pattern Recognition. ISBN 978-0-7695-4109-9. ISSN 1051-4651. [COBISS.SI-ID 8836948]

129. VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Spine-based coordinate system. V: Innovation from biomolecules to biosystems. 27th annual international conference of the IEEE engineering in medicine and biology society, September 1-4, 2005, Shanghai, China. [s. l.: s. n.], 2005. [4] str., ilustr. ISBN 0-7803-8741-4. [COBISS.SI-ID 4928084]

130. VRTOVEC, Tomaž, LIKAR, Boštjan, PERNUŠ, Franjo. Curved planar reformation of CT spine data. V: FITZPATRICK, J. Michael (ur.), REINHARDT, Joseph M. (ur.). Medical imaging 2005. Image Processing : 13-17 February 2005, San Diego, California, USA. Bellingham (USA): SPIE, cop. 2005. Str. 1446-1456, ilustr. Progress in biomedical optics and imaging, vol. 6, no. 24, Proceedings of SPIE, vol. 5747. ISBN 0-8194-5721-3. ISSN 1605-7422, ISSN 0277-786X. [COBISS.SI-ID 4764500]

131. VRTOVEC, Tomaž, LIKAR, Boštjan, TOMAŽEVIČ, Dejan, PERNUŠ, Franjo. Automated robust generation of compact 3D statistical shape models. V: FITZPATRICK, J. Michael (ur.), SONKA, Milan (ur.). Medical imaging 2004. Image Processing : 16-19 February 2004, San Diego, California, USA. Bellingham (USA): SPIE, cop. 2004. Vol. 2, str. 1312-1323. Progress in biomedical optics and imaging, vol. 5, no. 24, Proceedings of SPIE, vol. 5370. ISBN 0-8194-5283-1. ISSN 1605-7422, ISSN 0277-786X. [COBISS.SI-ID 4317268]

132. VRTOVEC, Tomaž, TOMAŽEVIČ, Dejan, LIKAR, Boštjan, PERNUŠ, Franjo. Statistical shape deformable model of a lumbar vertebra. V: DRBOHLAV, Ondřej (ur.). Computer vision - CVWW'03 : proceedings of the 8th Computer Vision Winter Workshop, February 3-6, 2003, Valtice, Czech Republic. Prague: Czech Pattern Recognition Society, 2003. Str. 91-96. ISBN 80-238-9967-8. [COBISS.SI-ID 3399764]

133. ŠTER, Rok Marko, PODOBNIK, Gašper, VRTOVEC, Tomaž. Generiranje sintetičnih CT slik iz MR slik področja glave in vratu z uporabo difuzijskih modelov. V: POTOČNIK, Božidar (ur.). ROSUS 2025 : računalniška obdelava slik in njena uporaba v Sloveniji 2025 : zbornik 19. strokovne konference : [20. marec 2025, Maribor, Slovenija]. 1. izd. Maribor: Univerza v Mariboru, Univerzitetna založba, 2025. Str. 41-54, ilustr. ISBN 978-961-286-960-1. https://press.um.si/index.php/ump/catalog/book/957/chapter/259. [COBISS.SI-ID 229861123]

134. ŠKRLJ, Luka, JELENC, Matija, PERNUŠ, Franjo, VRTOVEC, Tomaž. Zaznavanje oslonilnih točk aortne zaklopke v CT slikah s postopkom globokega učenja. V: POTOČNIK, Božidar (ur.). ROSUS 2023 : računalniška obdelava slik in njena uporaba v Sloveniji 2023 : zbornik 17. strokovne konference : [23. marec 2023, Maribor, Slovenija]. 1. izd. Maribor: Univerza v Mariboru, Univerzitetna založba, 2023. Str. 61-68, ilustr. ISBN 978-961-286-721-8. https://press.um.si/index.php/ump/catalog/book/769, DOI: 10.18690/um.feri.4.2023.6. [COBISS.SI-ID 146627587]

135. KNEZ, Dejan, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Avtomatska metoda načrtovanja velikosti in trajektorije pedikularnih vijakov. V: POTOČNIK, Božidar (ur.). ROSUS 2016 : računalniška obdelava slik in njena uporaba v Sloveniji 2016 : zbornik 11. strokovne konference, Maribor, 17. marec 2016. Maribor: Fakulteta za elektrotehniko, računalništvo in informatiko, Inštitut za računalništvo, Laboratorij za sistemsko programsko opremo, 2016. Str. 57-68, ilustr. ISBN 978-961-248-505-4. [COBISS.SI-ID 11308372]

136. KOREZ, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Razgradnja medicinskih slik hrbtenice. V: POTOČNIK, Božidar (ur.). ROSUS 2013 : računalniška obdelava slik in njena uporaba v Sloveniji 2013 : zbornik 8. strokovne konference, Maribor, 21. marec 2013. Maribor: Fakulteta za elektrotehniko, računalništvo in informatiko, Inštitut za računalništvo, 2013. Str. 72-79, ilustr. ISBN 978-961-248-375-3. [COBISS.SI-ID 9789268]

137. USENIK, Peter, VRTOVEC, Tomaž, PERNUŠ, Franjo, LIKAR, Boštjan. Sledenje oblik fosfolipidnih veziklov zajetih s fazno kontrastno mikroskopijo. V: POTOČNIK, Božidar (ur.). ROSUS 2010 : računalniška obdelava slik in njena uporaba v Sloveniji 2010 : zbornik 5. strokovne konference, Maribor, 18. marec 2010. V Mariboru: Fakulteta za elektrotehniko, računalništvo in informatiko, Inštitut za računalništvo, 2010. Str. 94-100, ilustr. ISBN 978-961-248-199-5. [COBISS.SI-ID 7651668]

138. VRTOVEC, Tomaž. The use of AI in orthopedic image analysis. V: Abstracts. Annual spine experts group meeting 2023, Ljubljana, Slovenia, 30. november-1. december 2023. [S.l]: Slovenian Spine Society and Spine Experts Group, 2023. Str. 43. https://seg2023.si/images/SPINE_23_abstracts.pdf. [COBISS.SI-ID 174753283]

139. GERNAAT, Sofie A.M., IŠGUM, Ivana, TESKE, Arco, HARBECK, Nadia, DE BRUIJNE, Marleen, MOLAN, Darja, VAN DER GRAAF, Rieke, GOMES, Eva, VRTOVEC, Tomaž, ROBBERS, Lourens, MARALDO, Maja, VAN DER LEIJ, Femke, VERKOOIJEN, Helena. The ARTILLERY project : developing, validating and prospectively evaluating trustworthy AI systems for early detection of cardiovascular disease risk in women with breast cancer using routine CT scans. V: Global Cardio Oncology Summit 2023 : Madrid, September 27-29. [S. l.]: Viajes El Corte Ingles. 2023, 1 spletni vir, ilustr. https://eposters.emma.events/gcos2023eposters/. [COBISS.SI-ID 171145219]

140. TURCOT, Olivier, KNEZ, Dejan, VRTOVEC, Tomaž, KADOURY, Samuel, PARENT, Stefan. Predictive model of spine correction following anterior vertebral body growth modulation in adolescent with idiopathic scoliosis. V: IMAST 2018. 25th International Meeting on Advanced Spine Techniques, July 11-14, 2018, Los Angeles, California, USA. [S. l.]: Scoliosis Research Society. 2018, str. 102, ilustr. https://www.srs.org/UserFiles/file/IMAST18-FPbook-v8-sm.pdf. [COBISS.SI-ID 12228692]

141. PETKOVIĆ, Uroš, KOREZ, Robert, VRTOVEC, Tomaž. Semi-automated measurement of the Cobb angle from 3D mesh models of the scoliotic spine. V: ŠTRUC, Vitomir (ur.), PERŠ, Janez (ur.). Book of abstracts. Ljubljana: Slovenian Pattern Recognition Society, 2017. Str. 27. ISBN 978-961-90901-8-3. http://www.isispa.org/support/ISPA2017_Booklet.pdf. [COBISS.SI-ID 11809364]

142. KNEZ, Dejan, MOHAR, Janez, CIRMAN, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Analysis of manual and computer-assisted preoperative pedicle screw placement planning. V: CAOS 2017. 17th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery, June 14-17, 2017, Aachen (Germany). [S. l.: s. n.], 2017. Str. 1. http://easychair.org/smart-program/CAOS2017/2017-06-16.html#talk:45063. [COBISS.SI-ID 11811412]

143. MOHAR, Janez, KNEZ, Dejan, CIRMAN, Robert, TREBŠE, Rihard, MIHALIČ, Rene, VRTOVEC, Tomaž. Comparison of automatically and manually obtained pedicle screw plans in deformities of the thoracic spine. Orthopaedic proceedings. March 2017, vol. 99-b, suppl. 5 11, str. 45. ISSN 2049-4416. http://www.bjjprocs.boneandjoint.org.uk/content/99-B/SUPP_5/11. [COBISS.SI-ID 1539322564]

144. KNEZ, Dejan, MOHAR, Janez, CIRMAN, Robert, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Analysis of manual and computer-assisted pre-operative pedicle screw placement planning. Orthopaedic proceedings. Dec. 1, 2017, vol. 99-b, suppl. 20 17, 1 str. ISSN 2049-4416. http://bjjprocs.boneandjoint.org.uk/content/99-B/SUPP_20/17. [COBISS.SI-ID 11908180]

145. MARTINČIČ, David, BROJAN, Miha, KOSEL, Franc, ŠTERN, Darko, VRTOVEC, Tomaž, ANTOLIČ, Vane, VENGUST, Rok. Optimum cement volume for vertebroplasty. V: Programme with abstracts. Annual Spine Experts Group Meeting and Slovenia 2017 Spine Symposium, Ljubljana, Slovenia, November 24-25, 2017. [S. l.: s. n., 2017]. Str. 8. [COBISS.SI-ID 11907668]

146. KNEZ, Dejan, NAHLE, Imad S., PARENT, Stefan, KADOURY, Samuel, VRTOVEC, Tomaž. Quantitative comparison of computer-assisted pedicle screw placement plans with actually inserted pedicle screws. V: Programme with abstracts. Annual Spine Experts Group Meeting and Slovenia 2017 Spine Symposium, Ljubljana, Slovenia, November 24-25, 2017. [S. l.: s. n., 2017]. Str. 31. [COBISS.SI-ID 11907412]

147. BRINK, Rob C., VAVRUCH, Ludvig, SCHLÖSSER, Tom P. C., ABUL-KASIM, Kasim, OHLIN, Acke, TROPP, Hans, CASTELEIN, René M., VRTOVEC, Tomaž. Three-dimensional pelvic incidence is much higher in (thoraco)lumbar scoliosis than in thoracic scoliosis and controls. V: Programme with abstracts. Annual Spine Experts Group Meeting and Slovenia 2017 Spine Symposium, Ljubljana, Slovenia, November 24-25, 2017. [S. l.: s. n., 2017]. Str. 20. [COBISS.SI-ID 11907924]

148. VODIČAR, Miha, KOŠAK, Robert, GORENŠEK, Matevž, KOREZ, Robert, VRTOVEC, Tomaž, KODER, Jadran, VENGUST, Rok. Ali perforacija krovnih plošč ob ledveni discektomiji povzroči regeneracijo medvretenčne ploščice?. V: 6. raziskovalni dan Ortopedske bolnišnice Valdoltra in [3.] Srečanje vertebrološkega združenja Slovenije, [Ankaran, 17. junij 2016]. [Ankaran]: Ortopedska bolnišnica Valdoltra, 2016. Str. 12. [COBISS.SI-ID 1538566852]

149. MOHAR, Janez, KNEZ, Dejan, CIRMAN, Robert, TREBŠE, Rihard, MIHALIČ, Rene, VRTOVEC, Tomaž. Comparison of automatically and manually obtained pedicle screw plans in deformities of the thoracic spine. V: MURPHY, Stephen B. (ur.). ISTA 2016 Boston abstracts. 29th Annual Congress of the International Society for Technology in Arthoplasty, October 5 to 8, 2016, Boston, USA. [S. l.: s. n.], 2016. Abstract no.4334, str. 1-4, ilustr. [COBISS.SI-ID 11690836]

150. VODIČAR, Miha, KOŠAK, Robert, GORENŠEK, Matevž, KOREZ, Robert, VRTOVEC, Tomaž, KODER, Jadran, VENGUST, Rok. Does vertebral end plate perforation cause annulus reparation and intervertebral space restoration? : a pilot randomized controlled trial. EFORTNET. 16th efort congress 2015, str. 1. https://efortnet.efort.org/group/network/elibrary. [COBISS.SI-ID 11094868]

151. MARTINČIČ, David, BROJAN, Miha, KOSEL, Franc, ŠTERN, Darko, VRTOVEC, Tomaž, VENGUST, Rok. Optimal cement volume for vertebroplasty - biomechanical study. EFORTNET. 16th efort congress 2015, str. 1. https://efortnet.efort.org/group/network/elibrary. [COBISS.SI-ID 11094356]

152. VODIČAR, Miha, KOŠAK, Robert, GORENŠEK, Matevž, KOREZ, Robert, VRTOVEC, Tomaž, KODER, Jadran, VENGUST, Rok. Intervertebral space restoration after lumbar discectomy : is vertebral and plate perforation the answer?. V: Eurospine 2015. Berlin; Heidelberg: Springer, 2015. S775-776. European spine journal, Vol. 24, suppl. 6. ISSN 0940-6719. http://link.springer.com/article/10.1007/s00586-015-4131-7. [COBISS.SI-ID 11247956]

153. SCHLÖSSER, Tom P. C., JANSSEN, Michiel M. A., VRTOVEC, Tomaž, PERNUŠ, Franjo, ÖNER, F. Cumhur, VIERGEVER, Max A., VINCKEN, Koen L., CASTELEIN, René M. The development of the ischio-iliac lordosis during growth as an essential adaptation towards human bipedalism and a determinant of sagittal balance. V: EPOS 33rd Annual Meeting : abstracts. European Pediatric Orthopaedic Society (EPOS), 33rd Annual Meeting, Apr 2-5, 2014, Bruges, Belgium. Heidelberg: Springer, 2014. Str. s34-s35. Journal of children's orthopaedics (Print), vol. 8, suppl. 1 (May 2014). ISSN 1863-2521. https://link.springer.com/content/pdf/10.1007%2Fs11832-014-0573-4.pdf. [COBISS.SI-ID 10578260]

154. SCHLÖSSER, Tom P. C., JANSSEN, Michiel M. A., VRTOVEC, Tomaž, PERNUŠ, Franjo, ÖNER, F. Cumhur, VIERGEVER, Max A., VINCKEN, Koen L., CASTELEIN, René M. The development of the ischio-iliac lordosis during growth as an essential adaptation towards human bipedalism and a determinant of sagittal balance. V: Eurospine 2014. Berlin; Heidelberg: Springer, 2015. S489. European spine journal, Vol. 23, suppl. 5 (Sep. 2014). ISSN 0940-6719. http://link.springer.com/article/10.1007/s00586-014-3515-4. [COBISS.SI-ID 11248468]

155. ANTOLIČ, Vane, MARTINČIČ, David, VENGUST, Rok, BROJAN, Miha, KOSEL, Franc, ŠTERN, Darko, VRTOVEC, Tomaž. Required cement volume for vertebroplasty. V: Rio de Janeiro TWC 2014 : abstract books. [S. l.: s. n.], 2014. Short oral presentations, str. 70. http://sicot.org/resources/File/Rio/Short%20Oral%20Presentations.pdf. [COBISS.SI-ID 10918484]

156. JANSSEN, Michiel M. A., VINCKEN, Koen L., RAAK, Sjoerd M. van, VRTOVEC, Tomaž, KEMP, Bastiaan, VIERGEVER, Max A., BARTELS, Lambertus W., CASTELEIN, René M. Sagittal spinal profile and spinopelvic balance in parents of scoliotic children, as compared to normal controls. V: Eurospine 2012. Berlin; Heidelberg: Springer, 2012. Str. s315-s316, ilustr. European spine journal (Print), vol. 21, iss. 3 supplement (May 2012). ISSN 0940-6719. [COBISS.SI-ID 10573908]

157. MARTINČIČ, David, BROJAN, Miha, KOSEL, Franc, ŠTERN, Darko, VRTOVEC, Tomaž, VENGUST, Rok. Optimal cement volume for vertebroplasty - biomechanical study. V: Final program and abstracts. Annual Spine Experts Group Meeting and Slovenia 2012 Spine Symposium, November 29th and 30th, 2012, Ljubljana, Slovenia. [S. l.: s. n., 2012]. Str. 28. [COBISS.SI-ID 10903124]

158. VRTOVEC, Tomaž, JANSSEN, M. M. A., PERNUŠ, Franjo, CASTELEIN, René M., VIERGEVER, Max A. Pelvic incidence : analysis in three-dimensions. V: DAVIES, Brian L. (ur.), JOSKOWICZ, Leo (ur.), COBB, Justin P. (ur.). Computer assisted orthopaedic surgery : proceedings. 11th Annual Meeting of CAOS-International, London, UK, June 15-18, 2011. [S. l.: s. n.], 2011. Str. 1-2. [COBISS.SI-ID 8419924]

159. VRTOVEC, Tomaž, VENGUST, Rok, LIKAR, Boštjan, PERNUŠ, Franjo. Symmetry of vertebral structures : can it be used to measure axial vertebral rotation?. V: Final program and abstracts. Slovenia 2010 Spine Symposium, April 9-10, 2010, Ljubljana, Slovenia. [Ljubljana: UMC, Department of orthopaedic surgery: Slovenian spine society], 2010. Str. 73. [COBISS.SI-ID 7690580]

160. IBRAGIMOV, Bulat, VRTOVEC, Tomaž. Landmark-based statistical shape representations. V: ZHENG, Guoyan (ur.), LI, Shuo (ur.), SZÉKELY, Gabor (ur.). Statistical shape and deformation analysis : methods, implementation and applications. London [etc.]: Academic Press, cop. 2017. Str. 89-113, ilustr. Computer vision and pattern recognition series. ISBN 978-0-12-810493-4. DOI: 10.1016/B978-0-12-810493-4.00005-5. [COBISS.SI-ID 11713364]

161. VRTOVEC, Tomaž. Automated determination of the spine-based coordinate system for an efficient cross-sectional visualization of 3D spine images. V: LI, Shuo (ur.), YAO, Jianhua (ur.). Spine imaging and image analysis. Cham [etc.]: Springer, cop. 2015. Str. 231-299, ilustr. Lecture notes in computational vision and biomechanics (Print), 18. ISBN 978-3-319-12507-7. ISSN 2212-9391. http://link.springer.com/chapter/10.1007/978-3-319-12508-4_8. [COBISS.SI-ID 10903636]

162. VRTOVEC, Tomaž, YAO, Jianhua, ZHENG, Guoyan, POZO, Jose M. Preface. V: VRTOVEC, Tomaž (ur.), et al. Computational methods and clinical applications in musculoskeletal imaging : revised selected papers. 6th International Workshop, MSKI 2018, held in conjunction with MICCAI 2018, Granada, Spain, September 16, 2018. Cham: Springer, cop. 2019. Str. v-vii. Lecture notes in computer science, 11404. ISBN 978-3-030-11165-6. ISSN 0302-9743. https://link.springer.com/content/pdf/bfm%3A978-3-030-11166-3%2F1.pdf. [COBISS.SI-ID 12340308]

163. GLOCKER, Ben, YAO, Jianhua, VRTOVEC, Tomaž, FRANGI, Alejandro F., ZHENG, Guoyan. Preface. V: GLOCKER, Ben (ur.), et al. Computational methods and clinical applications in musculoskeletal imaging : revised selected papers. 5th International Workshop, MSKI 2017, held in conjunction with MICCAI 2017, Quebec City, QC, Canada, September 10, 2017. Cham: Springer, cop. 2018. Str. v-vii. Lecture notes in computer science, 10734. ISSN 0302-9743. https://link.springer.com/content/pdf/bfm%3A978-3-319-74113-0%2F1.pdf. [COBISS.SI-ID 11965012]

164. VRTOVEC, Tomaž, YAO, Jianhua, ZHENG, Guoyan, POZO, Jose M. Preface. V: VRTOVEC, Tomaž (ur.), et al. MSKI 2018 : proceedings. 6th MICCAI Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging, Sep. 16, 2018, Granada, Spain. [S. l.: s. n.], 2018. Str. v-vi. https://drive.google.com/file/d/1_sS4MyI7ZyqZs__TK-Lrfs_tgPjMYmIh/view. [COBISS.SI-ID 12201300]

165. GLOCKER, Ben, YAO, Jianhua, VRTOVEC, Tomaž, FRANGI, Alejandro F., ZHENG, Guoyan. Preface. V: GLOCKER, Ben (ur.), et al. MSKI 2017 : proceedings. 5th MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging, MICCAI-MSKI2017, Sep. 10, 2017, Quebec City, Canada. [S. l.]: Wordpress.com, 2017. Str. v-vi. https://mski2017.files.wordpress.com/2017/09/miccai-mski2017.pdf. [COBISS.SI-ID 11810644]

166. YAO, Jianhua, VRTOVEC, Tomaž, ZHENG, Guoyan, FRANGI, Alejandro F., GLOCKER, Ben, LI, Shuo. Preface. V: YAO, Jianhua (ur.), et al. Computational methods and clinical applications for spine imaging : revised selected papers. 4th International Workshop and Challenge, CSI 2016, held in conjunction with MICCAI 2016, Athens, Greece, October 17, 2016. Cham: Springer, cop. 2016. Str. v-vi. Lecture notes in computer science, 10182. ISBN 978-3-319-55049-7. ISSN 0302-9743. [COBISS.SI-ID 11707988]

167. VRTOVEC, Tomaž, YAO, Jianhua, GLOCKER, Ben, KLINDER, Tobias, FRANGI, Alejandro F., ZHENG, Guoyan, LI, Shuo. Preface. V: VRTOVEC, Tomaž (ur.), et al. Computational methods and clinical applications for spine imaging : revised selected papers. Third International Workshop and Challenge, CSI 2015 held in conjunction with MICCAI 2015 Munich, Germany, October 5, 2015. [Cham]: Springer, cop. 2016. Str. v-vi. Lecture notes in computer science, 9402. ISBN 978-3-319-41826-1. ISSN 0302-9743. [COBISS.SI-ID 11712852]

168. YAO, Jianhua, GLOCKER, Ben, VRTOVEC, Tomaž, FRANGI, Alejandro F., ZHENG, Guoyan, LI, Shuo. Preface. V: YAO, Jianhua (ur.), et al. CSI 2016. 4th MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging, October 17, 2016, Athens, Greece. [S. l.: s. n.], 2016. Str. v-vi. [COBISS.SI-ID 11711316]

169. VRTOVEC, Tomaž, YAO, Jianhua, GLOCKER, Ben, KLINDER, Tobias, FRANGI, Alejandro F., ZHENG, Guoyan, LI, Shuo. Preface. V: VRTOVEC, Tomaž (ur.), et al. CSI 2015 : proceedings. 3rd MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging, October 5, 2015, Munich, Germany. [S. l.: s. n.], 2015. Str. v-vi. [COBISS.SI-ID 11712340]

170. VRTOVEC, Tomaž. Teorija linearnih sistemov : izpitne naloge z rešitvami. 1. izd. Ljubljana: Založba FE in FRI, 2011. 166 str., [2] str. pril., ilustr. ISBN 978-961-243-188-4. [COBISS.SI-ID 257966592]

171. VRTOVEC, Tomaž, LIKAR, Boštjan. Teorija linearnih sistemov : rešeni primeri in vaje. 1. izd. Ljubljana: Fakulteta za elektrotehniko, 2007. 139 str., ilustr. ISBN 978-961-243-076-4. [COBISS.SI-ID 236318976]

172. VRTOVEC, Tomaž. Biomedical informatics : laboratory practice. Ljubljana: Faculty of Electrical Engineering, Laboratory of Imaging Technologies, 2012. http://lit.fe.uni-lj.si/gradivo/BMI-LabVaje-eng.pdf. [COBISS.SI-ID 10461780]

173. VRTOVEC, Tomaž. Biomedicinska informatika : laboratorijske vaje. Ljubljana: Fakulteta za elektrotehniko, Laboratorij za slikovne tehnologije, 2012. http://lit.fe.uni-lj.si/gradivo/BMI-LabVaje-slo.pdf. [COBISS.SI-ID 10461524]

174. VRTOVEC, Tomaž. Biomedicinska informatika : predavanja. Ljubljana: Fakulteta za elektrotehniko, Laboratorij za slikovne tehnologije, 2012. http://lit.fe.uni-lj.si/gradivo/BMI-Predavanja-slo.pdf. [COBISS.SI-ID 10461268]

175. VRTOVEC, Tomaž. Slikovna informatika : laboratorijske vaje. Ljubljana: Fakulteta za elektrotehniko, Laboratorij za slikovne tehnologije, 2012. http://lit.fe.uni-lj.si/gradivo/SI-LabVaje-slo.pdf. [COBISS.SI-ID 10461012]

176. VRTOVEC, Tomaž. Medical informatics and diagnostics : laboratory practice. Ljubljana: Faculty of Electrical Engineering, Laboratory of Imaging Technologies, 2010. http://lit.fe.uni-lj.si/gradivo/MID-LabVaje-eng.pdf. [COBISS.SI-ID 10462804]

177. VRTOVEC, Tomaž. Medicinska informatika in diagnostika : laboratorijske vaje. Ljubljana: Fakulteta za elektrotehniko, Laboratorij za slikovne tehnologije, 2010. http://lit.fe.uni-lj.si/gradivo/MID-LabVaje-slo.pdf. [COBISS.SI-ID 10462548]

178. VRTOVEC, Tomaž. Evaluation of spinal and pelvic parameters from three-dimensional medical images = Evaluatie van wervelkolom- en bekkenparameters vanuit driedimensionale medische beelden : (met een samenvatting in het Nederlands). Bukovica: [T. Vrtovec], 2011. VIII, 239 str., ilustr. ISBN 978-961-276-168-4. [COBISS.SI-ID 256118016]

179. VRTOVEC, Tomaž. Automatic analysis of three-dimensional spine images : phd thesis. Ljubljana: [T. Vrtovec], 2007. XXXV, 145 str., graf. prikazi, tabele. Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 5985876]

180. VRTOVEC, Tomaž. Statistični deformabilni model oblike ledvenega vretenca : diplomsko delo. Ljubljana: [T. Vrtovec], 2002. III, 59 f., ilustr. [COBISS.SI-ID 3344468]

181. HAREJ, Maja, NEMEC, Ana, VRTOVEC, Tomaž. Onesnaženost zraka v Anhovem : raziskovalna naloga. Nova Gorica: [s.n.], 1995. 39 str., ilustr. [COBISS.SI-ID 511836]

182. PODOBNIK, Gašper, STROJAN, Primož, PETERLIN, Primož, IBRAGIMOV, Bulat, VRTOVEC, Tomaž. HaN-Seg : the head and neck organ-at-risk CT & MR segmentation dataset. [S. l.: s. n.], 2023. 1 spletni vir. https://zenodo.org/record/7442914#.Y76Zff6ZNaT, https://aapm.onlinelibrary.wiley.com/doi/10.1002/mp.16197. [COBISS.SI-ID 137181699]

183. VRTOVEC, Tomaž. Basic principles of deep learning : predavanje na University of Malta, Faculty of Health Sciences, Malta, 5. 12. 2024. [COBISS.SI-ID 220312835]

184. VRTOVEC, Tomaž. Medical imaging on the sunny side of the Alps – with focus on applications in radiotherapy : predavanje na University of Malta, Faculty of Health Sciences, Malta, 6. 12. 2024. [COBISS.SI-ID 220295939]

185. VRTOVEC, Tomaž. Automated analysis of spine images : from new clinical knowledge to practical solutions : predavanje na University Medical Center Utrecht; Utrecht University, Faculty of Medicine, 13. 6. 2017, Utrecht, Nizozemska. [COBISS.SI-ID 11767892]

186. VRTOVEC, Tomaž. Computerized analysis of spine images : towards new clinical knowledge and orthopaedic applications : predavanje na Ludwig Boltzmann Institute for Clinical Forensic Imaging (LBI CFI), Medical University of Graz, 1. 6. 2017, Gradec, Avstrija. [COBISS.SI-ID 11869780]

187. VRTOVEC, Tomaž. Computerized analysis of the spine and pelvis : towards new clinical knowledge and orthopaedic applications : predavanje na CHU Sainte-Justine, University of Montréal, 14. 9. 2017, Montréal, Canada. [COBISS.SI-ID 11811924]

188. NAHLE, Imad S., KNEZ, Dejan, VRTOVEC, Tomaž, PARENT, Stefan, KADOURY, Samuel. Computer-assisted pedicle screw planning from pre-operative CT : a quantitative comparison with post-operative 3D reconstructions : prispevek na konferenci 47e Réunion annu elle de la Société de la scoliose du Québec, octobre 19-21 2017. [COBISS.SI-ID 11869268]

189. BRINK, R. C., VAVRUCH, L., SCHLÖSSER, Tom P. C., ABUL-KASIM, Kasim, OHLIN, Acke, TROPP, Hans, CASTELEIN, René M., VRTOVEC, Tomaž. Three-dimensional pelvic incidence is much higher in (thoraco)lumbar scoliosis than in thoracic scoliosic and controls : prispevek na srečanju Meeting of the Nordic Spinal Deformities Society, NSDS 2017, 24-26 August 2017, Stockholm, Sweden. [COBISS.SI-ID 11875924]

190. IBRAGIMOV, Bulat, LIKAR, Boštjan, PERNUŠ, Franjo, VRTOVEC, Tomaž. Automatic cephalometric X-ray landmark detection by applying game theory and random forests : prispevek na konferenci 11th IEEE International Symposium on Biomedical Imaging, ISBI 2014, 29. april - 2. maj 2014, Peking, Kitajska. [COBISS.SI-ID 10920532]

191. JANSSEN, Michiel M. A., VRTOVEC, Tomaž, PERNUŠ, Franjo, ÖNER, F. C., VEREECKE, Evie E., CHANNON, Anthony, VIERGEVER, Max A., VINCKEN, Koen L., CASTELEIN, René M. The pelvic lordosis : an essential adaptation in human evolution, and a determinant of spinopelvic alignment. Istanbul: 19th International Meeting on Advanced Spine Techniques, 2012. [COBISS.SI-ID 9314388]

192. JANSSEN, Michiel M. A., VINCKEN, Koen L., VRTOVEC, Tomaž, KEMP, Bastiaan, VIERGEVER, Max A., BARTELS, Lambertus W., CASTELEIN, Ren M. Sagittal spinal profile and spinopelvic balance in parents of scoliotic children, as compared to normal controls. Istanbul: 19th International Meeting on Advanced Spine Techniques, 2012. [COBISS.SI-ID 9314132]

193. VRTOVEC, Tomaž. Predstavitev projekta ARTILLERY - Artificial Intelligence for early detection of non-communicable disease risk in people with breast cancer (Obzorje Evropa) : Grozd Zdravje in Misija rak v programu Obzorje Evropa na Ministrstvu za visoko šolstvo, znanost in inovacije, dvorana Paviljona, Kmetijski inštitut Slovenije, Ljubljana, 11. 9. 2023. [COBISS.SI-ID 171087107]

194. PODOBNIK, Gašper, STROJAN, Primož, PETERLIN, Primož, IBRAGIMOV, Bulat, VRTOVEC, Tomaž. HaN-Seg : the head and neck organ-at-risk CT & MR segmentation challenge : online, 27. 3. - 30. 12. 2023. [COBISS.SI-ID 149951747]

195. Image analysis & stereology : official journal of the International Society for Stereology. VRTOVEC, Tomaž (področni urednik 2014-). [Tiskana izd.]. Ljubljana: Društvo za stereologijo in kvantitativno analizo slike, Medicinska fakulteta, 2000-. ISSN 1580-3139. https://www.ias-iss.org/ojs/IAS/, http://www.dlib.si, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 106479104]

196. Journal of medical imaging. VRTOVEC, Tomaž (urednik 2015-). Bellingham: Society of Photo-Optical Instrumentation Engineers, 2014-. ISSN 2329-4310. http://MedicalImaging.SPIEDigitalLibrary.org. [COBISS.SI-ID 11064916]

197. Zdravniški vestnik : glasilo Slovenskega zdravniškega društva. VRTOVEC, Tomaž (urednik 2023-). [Tiskana izd.]. Ljubljana: Slovensko zdravniško društvo, 1992-. ISSN 1318-0347. http://vestnik.szd.si/index.php/ZdravVest, http://www.dlib.si/details/URN:NBN:SI:spr-A30MFZKP, Digitalna knjižnica Slovenije - dLib.si, Repozitorij Univerze v Ljubljani – RUL. [COBISS.SI-ID 32893696]

198. VRTOVEC, Tomaž (urednik), YAO, Jianhua (urednik), ZHENG, Guoyan (urednik), POZO, Jose M. (urednik), 6th International Workshop, MSKI 2018, held in conjunction with MICCAI 2018, Granada, Spain, September 16, 2018. Computational methods and clinical applications in musculoskeletal imaging : revised selected papers. Cham: Springer, cop. 2019. XII, 152 str., ilustr. Lecture notes in computer science, 11404. ISBN 978-3-030-11165-6. ISSN 0302-9743. https://link.springer.com/book/10.1007/978-3-030-11166-3, DOI: 10.1007/978-3-030-11166-3. [COBISS.SI-ID 12340052]

199. GLOCKER, Ben (urednik), YAO, Jianhua (urednik), VRTOVEC, Tomaž (urednik), FRANGI, Alejandro F. (urednik), ZHENG, Guoyan (urednik), 5th International Workshop, MSKI 2017, held in conjunction with MICCAI 2017, Quebec City, QC, Canada, September 10, 2017. Computational methods and clinical applications in musculoskeletal imaging : revised selected papers. Cham: Springer, cop. 2018. XII, 159 str., ilustr. Lecture notes in computer science, 10734. ISSN 0302-9743. https://link.springer.com/book/10.1007/978-3-319-74113-0. [COBISS.SI-ID 11964756]

200. VRTOVEC, Tomaž (urednik), YAO, Jianhua (urednik), ZHENG, Guoyan (urednik), POZO, Jose M. (urednik), 6th MICCAI Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging, Sep. 16, 2018, Granada, Spain. MSKI 2018 : proceedings. [S. l.: s. n.], 2018. https://drive.google.com/file/d/1_sS4MyI7ZyqZs__TK-Lrfs_tgPjMYmIh/view. [COBISS.SI-ID 12201044]

201. GLOCKER, Ben (urednik), YAO, Jianhua (urednik), VRTOVEC, Tomaž (urednik), FRANGI, Alejandro F. (urednik), ZHENG, Guoyan (urednik), 5th MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging, MICCAI-MSKI2017, Sep. 10, 2017, Quebec City, Canada. MSKI 2017 : proceedings. [S. l.]: Wordpress.com, 2017. https://mski2017.files.wordpress.com/2017/09/miccai-mski2017.pdf. [COBISS.SI-ID 11809620]

202. VRTOVEC, Tomaž (urednik), YAO, Jianhua (urednik), GLOCKER, Ben (urednik), KLINDER, Tobias (urednik), FRANGI, Alejandro F. (urednik), ZHENG, Guoyan (urednik), LI, Shuo (urednik), Third International Workshop and Challenge, CSI 2015 held in conjunction with MICCAI 2015 Munich, Germany, October 5, 2015. Computational methods and clinical applications for spine imaging : revised selected papers. [Cham]: Springer, cop. 2016. X, 158 str., ilustr. Lecture notes in computer science, 9402. ISBN 978-3-319-41826-1. ISSN 0302-9743. DOI: 10.1007/978-3-319-41827-8. [COBISS.SI-ID 11452756]

203. YAO, Jianhua (urednik), VRTOVEC, Tomaž (urednik), ZHENG, Guoyan (urednik), FRANGI, Alejandro F. (urednik), GLOCKER, Ben (urednik), LI, Shuo (urednik), 4th International Workshop and Challenge, CSI 2016, held in conjunction with MICCAI 2016, Athens, Greece, October 17, 2016. Computational methods and clinical applications for spine imaging : revised selected papers. Cham: Springer, cop. 2016. X, 145 str., ilustr. Lecture notes in computer science, 10182. ISBN 978-3-319-55049-7. ISSN 0302-9743. http://link.springer.com/book/10.1007/978-3-319-55050-3. [COBISS.SI-ID 11707732]

204. YAO, Jianhua (urednik), GLOCKER, Ben (urednik), VRTOVEC, Tomaž (urednik), FRANGI, Alejandro F. (urednik), ZHENG, Guoyan (urednik), LI, Shuo (urednik), 4th MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging, October 17, 2016, Athens, Greece. CSI 2016. [S. l.: s. n.], 2016. 1 USB ključ, 7 cm. [COBISS.SI-ID 11598420]

205. VRTOVEC, Tomaž (urednik), YAO, Jianhua (urednik), GLOCKER, Ben (urednik), KLINDER, Tobias (urednik), FRANGI, Alejandro F. (urednik), ZHENG, Guoyan (urednik), LI, Shuo (urednik), 3rd MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging, October 5, 2015, Munich, Germany. CSI 2015 : proceedings. [S. l.: s. n.], 2015. 1 USB ključ, 4 cm. [COBISS.SI-ID 11598676]

206. ŠTERN, Darko. Automated analysis of vertebral deformations in three-dimensional medical images : phd thesis. Ljubljana: [D. Štern], 2012. XIV, 2, 96 str., ilustr. [COBISS.SI-ID 262692096]

207. KNEZ, Dejan. Computer-assisted design and analysis of pedicle screw placement based on medical images of the spine : PhD thesis. Ljubljana: [D. Knez], 2018. XXIX, 134 str., ilustr. Repozitorij Univerze v Ljubljani – RUL, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 12080212]

208. LESJAK, Žiga. Avtomatska zaznava sprememb bele možganovine v magnetno resonančnih slikah : doktorska disertacija. Ljubljana: [Ž. Lesjak], 2017. XIV, 85 str., ilustr. Repozitorij Univerze v Ljubljani – RUL, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 11731028]

209. KOREZ, Robert. Automated analysis of spinal structures in three-dimensional medical images using deformable models : PhD thesis. Ljubljana: [R. Korez], 2016. XXVII, 112 str., ilustr. Repozitorij Univerze v Ljubljani – RUL, Digitalna knjižnica Slovenije - dLib.si. [COBISS.SI-ID 11355732]

210. IBRAGIMOV, Bulat. Segmentation of medical images by game-theoretic approaches : PhD thesis. Ljubljana: [B. Ibragimov], 2014. 129 str., ilustr. [COBISS.SI-ID 10644820]

211. ŠTERN, Darko. Automated detection of vertebrae in three-dimensional spine images : master's thesis = [Avtomatsko zaznavanje vretenc v tridimenzionalnih slikah hrbtenice : magistrsko delo]. Ljubljana: [D. Štern], 2009. 73 str., ilustr. [COBISS.SI-ID 7298388]

212. ŠTER, Rok Marko. Generiranje računalniško tomografskih slik iz magnetno resonančnih slik področja glave in vratu na podlagi umetne inteligence z uporabo difuzijskih modelov : magistrsko delo : magistrski študijski program druge stopnje Elektrotehnika. Ljubljana: [R. M. Šter], 2025. 1 spletni vir (1 datoteka PDF (XVIII, 59 str.)), ilustr. Repozitorij Univerze v Ljubljani – RUL. [COBISS.SI-ID 233510147]

213. OCEPEK, Domen. Segmentacija ledvenih vretenc v računalniško tomografskih slikah hrbtenice z uporabo globokih implicitnih statističnih modelov oblike : magistrsko delo : magistrski študijski program druge stopnje Elektrotehnika. Ljubljana: [D. Ocepek], 2024. 1 spletni vir (1 datoteka PDF (X, 41 str.)), ilustr. Repozitorij Univerze v Ljubljani – RUL. [COBISS.SI-ID 199629059]

214. ŠKRLJ, Luka. Računalniško podprto določanje oslonilnih točk aortne zaklopke v tridimenzionalnih računalniško tomografskih slikah srca na podlagi globokega učenja : magistrsko delo : magistrski študijski program druge stopnje Elektrotehnika. Ljubljana: [L. Škrlj], 2023. XVIII, 45 str., ilustr. Repozitorij Univerze v Ljubljani – RUL. [COBISS.SI-ID 165355779]

215. RADOVIĆ, Božidarka. Integration between electronic prescribing system and pharmacy inforamtion [!] system using FHIR standard : master's thesis : second cycle postgraduate study programme in Electrical Engineering. Ljubljana: [B. Radović], 2019. 78 str., ilustr. https://repozitorij.uni-lj.si/IzpisGradiva.php?id=111243. [COBISS.SI-ID 12706900]

216. MALKOČ, Roko. Razvoj sistema za predpisovanje elektronskih zdravniških receptov : diplomsko delo univerzitetnega študija. Ljubljana: [R. Malkoč], 2016. X, 47 str., ilustr. https://repozitorij.uni-lj.si/IzpisGradiva.php?id=84845. [COBISS.SI-ID 11502420]

217. JAKOPIČ, Črt. Razvoj namenskega programskega orodja za določanje kotov naklona zobnih kanalov v tridimenzionalnih računalniško tomografskih slikah : diplomsko delo. Ljubljana: [Č. Jakopič], 2015. 33 f., ilustr. https://repozitorij.uni-lj.si/IzpisGradiva.php?id=73392. [COBISS.SI-ID 11209044]

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dr. Tomaž Vrtovec [23404]

Osebna bibliografija za obdobje 1995-2025

ČLANKI IN DRUGI SESTAVNI DELI

1.01 Izvirni znanstveni članek

1.02 Pregledni znanstveni članek

1.03 Drugi znanstveni članki

1.04 Strokovni članek

1.08 Objavljeni znanstveni prispevek na konferenci

1.09 Objavljeni strokovni prispevek na konferenci

1.12 Objavljeni povzetek znanstvenega prispevka na konferenci

1.16 Samostojni znanstveni sestavek ali poglavje v monografski publikaciji

1.20 Predgovor, uvodnik, spremna beseda

MONOGRAFIJE IN DRUGA ZAKLJUČENA DELA

2.03 Univerzitetni, visokošolski ali višješolski učbenik z recenzijo

2.05 Drugo učno gradivo

2.08 Doktorska disertacija

2.11 Diplomsko delo

2.12 Končno poročilo o rezultatih raziskav

2.20 Zaključena znanstvena zbirka raziskovalnih podatkov

IZVEDENA DELA (DOGODKI)

3.14 Predavanje na tuji univerzi

3.15 Prispevek na konferenci brez natisa

3.16 Vabljeno predavanje na konferenci brez natisa

3.25 Druga izvedena dela

SEKUNDARNO AVTORSTVO

Urednik

Mentor pri doktorskih disertacijah

Mentor pri doktorskih disertacijah (bolonjski študij)

Mentor pri magistrskih delih

Mentor pri magistrskih delih (bolonjski študij)

Mentor pri diplomskih delih

Recenzent

Član komisije za zagovor