Klara Kuret

1. KURET, Klara. Priprava rekombinantnega ß-katenina in FHL ter optimizacija proizvodnega procesa : diplomsko delo : univerzitetni študijski program 1. stopnje Biokemija. Ljubljana: [K. Kuret], 2017. 62 str., ilustr. [COBISS.SI-ID 1537499075]

2. KURET, Klara. Iskanje novih zaviralcev bakterijske RNA polimeraze in silico = In silico search for novel bacterial RNA polymerase inhibitors : univerzitetni študijski programi II. stopnje industrijska farmacija. Ljubljana: [K. Kuret], 2020. X, 57 str., ilustr., tabele graf. prikazi. https://repozitorij.uni-lj.si/IzpisGradiva.php?id=116985. [COBISS.SI-ID 30634243]

3. HALLEGGER, Martina, CHAKRABARTI, Anob M., LEE, Flora C. Y., LEE, Bo Lim, AMALIETTI, Aram-Gustav, ODEH, Hana M., COPLEY, Katie E., RUBIEN, Jack D., PORTZ, Bede, KURET, Klara, HUPPERTZ, Ina, RAU, Frédérique, PATANI, Rickie, FAWZI, Nicolas L., SHORTER, James, LUSCOMBE, Nicholas M., ULE, Jernej. TDP-43 condensation properties specify its RNA-binding and regulatory repertoire. Cell. 2 Sep. 2021, vol. 184, iss. 18, str. 4680-4696, e1-e22, ilustr. ISSN 0092-8674. https://www.cell.com/cell/fulltext/S0092-8674(21)00877-1?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867421008771%3Fshowall%3Dtrue, https://dirros.openscience.si/IzpisGradiva.php?id=14662&lang=slv, DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, DOI: 10.1016/j.cell.2021.07.018. [COBISS.SI-ID 89271811]

4. KURET, Klara, AMALIETTI, Aram-Gustav, JONES, D. Marc, CAPITANCHIK, Charlotte, ULE, Jernej. Positional motif analysis reveals the extent of specificity of protein-RNA interactions observed by CLIP. Genome biology. [Online ed.]. 2022, vol. 23, [iss. 1], str. 1-34, ilustr. ISSN 1474-760X. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-022-02755-2, DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, DOI: 10.1186/s13059-022-02755-2. [COBISS.SI-ID 129713155]

5. KURET, Klara. 3’UTR mRNP repositioning triggers selective mRNA decay to drive rapid embryonic morphogenesis. V: 17th Microsymposium on RNA Biology : Vienna BioCenter, May 3rd - 5th 2023. [S. l.: s. n.], 2023. Str. [19]. https://www.oeaw.ac.at/fileadmin/Institute/IMBA/scientific/Events_imba/Microsymposium/Micro_2023/2023_Microsymposium_abstract_booklet.pdf. [COBISS.SI-ID 160543491]

6. MODIC, Miha, KURET, Klara, GENDEREN, Emiel van, STEINHAUSER, Sebsastian, FARAWAY, Rupert, KLOBUČAR, Tajda, BERGE, Derk ten, ULE, Jernej. 3’UTR ribonucleoprotein reassembly drives selective mRNA decay to implement developmental signalling. V: SEPČIĆ, Kristina (ur.), PAVŠIČ, Miha (ur.). 15th Meeting of the Slovenian Biochemical Society with International Participation = 15. srečanje Slovenskega biokemijskega društva z mednarodno udeležbo : book of abstracts = zbornik povzetkov : Portorož, 20-23 September 2023 = [20.–23. september 2023, Portorož, Slovenija]. Ljubljana: Slovenian Biochemical Society: = Slovensko biokemijsko društvo, 2023. Str. 32. ISBN 978-961-95941-1-7. https://portoroz2023.sbd.si/upload/docs/SBD2023_Portoroz-Book_of_Abstracts.pdf. [COBISS.SI-ID 169677315]

7. KURET, Klara. Computational investigation of protein-RNA interactions detected by CLIP, their specificity and dynamics in embryonic development : doctoral dissertation = Uporaba računskih pristopov za preučevanje stikov med proteini in RNK, zaznanih z metodo CLIP, ter njihove specifičnosti in dinamike v embrionalnem razvoju : doktorska disertacija. Ljubljana: [K. Kuret], 2024. XXIII, 119 str., ilustr. [COBISS.SI-ID 187864579]

8. HORLACHER, Marc, WAGNER, Nils, MOYON, Lambert, KURET, Klara, GOEDERT, Nicolas, SALVATORE, Marco, ULE, Jernej, GAGNEUR, Julien, WINTHER, Ole, MARSICO, Annalisa. Towards in silico CLIP-seq : predicting protein-RNA interaction via sequence-to-signal learning. Genome biology. [Online ed.]. 2023, vol. 24, [iss. 1], article no. 180, str. 1-37, ilustr. ISSN 1474-760X. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-023-03015-7, DiRROS - Digitalni repozitorij raziskovalnih organizacij Slovenije, DOI: 10.1186/s13059-023-03015-7. [COBISS.SI-ID 163304195]

9. VADNJAL, Neža, GNIDOVEC, Luka, KURET, Klara, FARAWAY, Rupert, HEAVEN, Neve Costello, ULE, Jernej. Co-regulation of intrinsically disordered proteins via interstasis. V: The complex life of RNA : EMBO | EMBL Symposium : 15 – 18 October 2024, EMBL Heidelberg and Virtual : [abstracts of papers]. [S. l.: s. n., 2024]. Str. 306. [COBISS.SI-ID 219148803]

10. MODIC, Miha, KURET, Klara, STEINHAUSER, Sebastian, FARAWAY, Rupert, GENDEREN, Emiel van, MOZOS, Igor Ruiz de los, NOVLJAN, Jona, VIČIČ, Žiga, LEE, Flora C. Y., BERGE, Derk ten, LUSCOMBE, Nicholas M., ULE, Jernej. Poised PABP–RNA hubs implement signal-dependent mRNA decay in development. Nature structural & molecular biology. Online ed. 2024, vol. 31, iss. 9, str. 1439-1447, ilustr. ISSN 1545-9985. https://www.nature.com/articles/s41594-024-01363-x, DOI: 10.1038/s41594-024-01363-x. [COBISS.SI-ID 205561859]